Biochemistry Division, Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt; Crime scene investigation (CSI) Laboratory, Ministry of Interior, Cairo 11517, Egypt.
Biochemistry Division, Chemistry Department, Faculty of Science, Cairo University, Giza 12613, Egypt.
Forensic Sci Int. 2024 Nov;364:112247. doi: 10.1016/j.forsciint.2024.112247. Epub 2024 Oct 9.
The case of the monozygotic (MZ) twin as a suspect demonstrates a practical problem in forensic casework. As the MZ twins are genetically identical, they share the same short tandem repeat (STR) profile. Many studies showed that older MZ twins have significant differences in overall content and genomic distribution of methylation between them. However, studies addressing the investigation of epigenetic MZ triplet differentiation in various forensic reference materials are lacking. Here, one triplet set of Egyptian MZ twins was used as an analog to a forensic case. The genome-wide methylation analysis was performed via the new Human Methylation EPIC BeadChip array. Following normalization methods, potential differentially methylated positions (DMPs) were discovered. This resulted in the detection of 24 potential DMPs in reference-type blood DNA and 11 potential DMPs in reference-type buccal DNA. Then, the Kyoto Encyclopedia of Genes and Genomes (KEGG) and Gene Ontology (GO) analyses were performed to show the associated biological functions. Our findings revealed that the 35 potential DMPs were enriched in 283 significant GO terms. These terms are mainly enriched in the immune system. Overall, this study demonstrates the general feasibility of epigenetic MZ triplet differentiation in the forensic context and highlights that some potential DMPs identified in blood DNA were not informative in buccal DNA. This is due to various reasons, including the tissue specificity of DNA methylation.
同卵(MZ)双胞胎作为嫌疑人的案例表明了法医学工作中的一个实际问题。由于 MZ 双胞胎在基因上是完全相同的,他们具有相同的短串联重复(STR)图谱。许多研究表明,年长的 MZ 双胞胎之间在整体甲基化内容和基因组分布方面存在显著差异。然而,关于在各种法医参考材料中调查表观遗传 MZ 三胞胎分化的研究还很少。在这里,我们使用一组埃及 MZ 双胞胎作为法医学案例的模拟。通过新的人类甲基化 EPIC BeadChip 阵列进行了全基因组甲基化分析。在进行归一化方法后,发现了潜在的差异甲基化位置(DMP)。这导致在参考型血液 DNA 中检测到 24 个潜在的 DMP,在参考型口腔 DNA 中检测到 11 个潜在的 DMP。然后,进行京都基因与基因组百科全书(KEGG)和基因本体论(GO)分析,以显示相关的生物学功能。我们的研究结果表明,35 个潜在的 DMPs 富集在 283 个显著的 GO 术语中。这些术语主要富集在免疫系统中。总体而言,这项研究表明了在法医学背景下进行表观遗传 MZ 三胞胎分化的一般可行性,并强调了在血液 DNA 中鉴定出的一些潜在的 DMP 在口腔 DNA 中没有信息。这是由于包括 DNA 甲基化的组织特异性在内的各种原因。