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Identification of targetable epigenetic vulnerabilities for uveal melanoma.

作者信息

Yenisehirli G, Borges S, Braun S, Zuniga A N, Quintana G I, Kutsnetsoff J N, Rodriguez S, Adis E V, Lopez S, Dollar J J, Stathias V, Volmar C H, Karaca E, Brothers S P, Bilbao D C, Harbour J W, Correa Z M, Kurtenbach S

机构信息

Department of Ophthalmology and Sylvester Comprehensive Cancer Center, University of Miami Miller School of Medicine.

Interdisciplinary Stem Cell Institute (ISCI), University of Miami Miller School of Medicine.

出版信息

bioRxiv. 2025 Feb 25:2024.10.11.617464. doi: 10.1101/2024.10.11.617464.


DOI:10.1101/2024.10.11.617464
PMID:39416076
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11482939/
Abstract

Uveal melanoma (UM) is the most common primary intraocular malignancy in adults, with a strong predilection for hepatic metastasis, occurring in approximately 50% of cases. Metastatic UM remains highly resistant to therapy and is almost invariably fatal. The strongest genetic drivers of UM metastasis are loss-of-function mutations in tumor suppressor , an epigenetic regulator that serves as the ubiquitin hydrolase subunit of the polycomb repressive deubiquitinase (PR-DUB) complex, and a key player in global epigenetic regulation. Inactivation of BRCA Associated Protein 1 (BAP1) has been shown to induce widespread epigenetic alterations across multiple model systems. To identify novel therapeutic strategies, we investigated whether targeting the epigenome could reveal new vulnerabilities in UM. We performed high-throughput compound screening using a curated epigenetic inhibitor library and identified BET (bromodomain and extra-terminal domain) inhibition as a particularly promising approach. Interestingly, we observed significant heterogeneity in the efficacy of different BET inhibitors in UM. While previous clinical trials with two BET inhibitors have failed to show efficacy in UM, our findings highlight substantial differences in the potency of specific BET inhibitors for this malignancy. Notably, the BET inhibitor mivebresib (ABBV-075) significantly improved survival rates by 50% in a metastatic UM xenograft mouse model and completely prevented detectable metastases in the bones, spinal cord, and brain. Unexpectedly, RNA sequencing revealed a strong transcriptional overlap between BET inhibition and histone deacetylase (HDAC) inhibition-- an approach currently under clinical evaluation for UM treatment. Both BET and HDAC inhibitors reversed gene expression signatures associated with high metastatic risk and induced a neuronal differentiation-like phenotype in UM cells. Together, our findings demonstrate that UM cells exhibit a distinct vulnerability to BET inhibition and establish BET inhibitors as promising candidates for further clinical evaluation for metastatic UM.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/45cc2061ad1d/nihpp-2024.10.11.617464v2-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/00273e5653f1/nihpp-2024.10.11.617464v2-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/53b770e43e83/nihpp-2024.10.11.617464v2-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/ec20e5307f2e/nihpp-2024.10.11.617464v2-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/6150a92fa5bc/nihpp-2024.10.11.617464v2-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/a108a2368d07/nihpp-2024.10.11.617464v2-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/45cc2061ad1d/nihpp-2024.10.11.617464v2-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/00273e5653f1/nihpp-2024.10.11.617464v2-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/53b770e43e83/nihpp-2024.10.11.617464v2-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/ec20e5307f2e/nihpp-2024.10.11.617464v2-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/6150a92fa5bc/nihpp-2024.10.11.617464v2-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/a108a2368d07/nihpp-2024.10.11.617464v2-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/729e/11867429/45cc2061ad1d/nihpp-2024.10.11.617464v2-f0006.jpg

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[1]
Identification of targetable epigenetic vulnerabilities for uveal melanoma.

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[3]
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[4]
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[8]
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[9]
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[10]
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引用本文的文献

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本文引用的文献

[1]
The BET inhibitor JQ1 suppresses tumor survival by ABCB5-mediated autophagy in uveal melanoma.

Cell Signal. 2025-1

[2]
15-Gene Expression Profile and as Integrated Prognostic Test for Uveal Melanoma: First Report of Collaborative Ocular Oncology Group Study No. 2 (COOG2.1).

J Clin Oncol. 2024-10

[3]
BET Bromodomain Inhibition Potentiates Ocular Melanoma Therapy by Inducing Cell Cycle Arrest.

Invest Ophthalmol Vis Sci. 2024-7-1

[4]
Emerging therapeutic strategies for metastatic uveal melanoma: Targeting driver mutations.

Pigment Cell Melanoma Res. 2024-5

[5]
FOXM1 promote the growth and metastasis of uveal melanoma cells by regulating CDK2 expression.

Int Ophthalmol. 2024-2-11

[6]
PRAME induces genomic instability in uveal melanoma.

Oncogene. 2024-2

[7]
Multi-omics comparison of malignant and normal uveal melanocytes reveals molecular features of uveal melanoma.

Cell Rep. 2023-9-26

[8]
Advances in the clinical management of uveal melanoma.

Nat Rev Clin Oncol. 2023-2

[9]
Characterizing metastatic uveal melanoma patients who develop symptomatic brain metastases.

Front Oncol. 2022-9-8

[10]
Connecting omics signatures and revealing biological mechanisms with iLINCS.

Nat Commun. 2022-8-9

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