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基于喷雾接种和图像分析的豌豆叶片白粉病严重程度定量分析

Spray inoculation and image analysis-based quantification of powdery mildew disease severity on pea leaves.

作者信息

Ray Poonam, Chandran Divya

机构信息

Laboratory of Plant-Microbe Interactions, Regional Centre for Biotechnology, NCR Biotech Science Cluster, Faridabad, 121001, India.

出版信息

MethodsX. 2024 Sep 25;13:102980. doi: 10.1016/j.mex.2024.102980. eCollection 2024 Dec.

Abstract

Pea () is an important agricultural legume crop, but powdery mildew disease caused by the biotrophic fungus regularly limits its annual yield. Assays to evaluate the efficacy of potential antifungal compounds or resistance genes for disease control require a simple fungal inoculation method that provides control over the initial inoculum concentration and enables uniform inoculum distribution within a leaf and across replicates as well as a method for the quantitative assessment of disease severity. Here, we present an easy spray inoculation method for the uniform distribution of a defined concentration of conidia on the leaves of pea plants and a semi-automated image analysis-based quantification of disease symptoms. The uniformity in conidial distribution was validated using a novel grading system termed the uniformity index. In addition, RT-qPCR was used to validate the reproducibility of the spray inoculation method and image analysis-based disease quantification. These procedures permit the accurate quantification of powdery mildew disease severity at macroscopic and molecular levels.•Uniform and reproducible inoculum distribution on leaves using a simple and inexpensive spray device•Rapid and reproducible quantification of powdery mildew disease symptoms using open-source software without the requirement of computational expertise.

摘要

豌豆是一种重要的豆科农作物,但由活体营养型真菌引起的白粉病经常限制其年产量。评估潜在抗真菌化合物或抗病基因对病害控制效果的试验需要一种简单的真菌接种方法,该方法能够控制初始接种物浓度,并能使接种物在叶片内以及各重复样本间均匀分布,同时还需要一种对病害严重程度进行定量评估的方法。在此,我们介绍一种简单的喷雾接种方法,可将特定浓度的白粉病菌分生孢子均匀分布在豌豆植株叶片上,以及一种基于半自动图像分析的病害症状定量方法。分生孢子分布的均匀性通过一种名为均匀度指数的新型分级系统进行验证。此外,还利用逆转录定量聚合酶链反应(RT-qPCR)来验证喷雾接种方法和基于图像分析的病害定量的可重复性。这些方法能够在宏观和分子水平上准确量化白粉病的严重程度。

  • 使用简单且廉价的喷雾装置在叶片上实现均匀且可重复的接种物分布

  • 使用开源软件快速且可重复地定量白粉病症状,无需计算专业知识

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/85b6/11489057/f7210a0a7553/ga1.jpg

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