一种研究人类中性粒细胞中V8蛋白酶的降解组的新型N端蛋白质组学方法的开发。

Development of a New N-Terminomic Method to Study the Pathodegradome of the V8 Protease in Human Neutrophils.

作者信息

Mustor Emilee M, Frey Andrew M, Jobson Mary-Elizabeth, Chaput Dale, Shaw Lindsey Neil

出版信息

bioRxiv. 2024 Nov 8:2024.11.08.622692. doi: 10.1101/2024.11.08.622692.

Abstract

UNLABELLED

is a notorious human pathogen that relies on an array of virulence factors to engender infection and evade the host-immune system. Among these are the secreted proteases, which promote pathogenesis by degrading host proteins and modulating host-defenses. Human neutrophils play a pivotal role in these defenses, acting as the first responders against invading bacteria. While many effectors of virulence have been shown to target leukocytes, there is limited knowledge on how the extracellular proteases modulate neutrophil fate. Typically, protease substrates have been identified in isolated settings using one at a time approaches; with neutrophil targets few and far between. Herein, we have developed a novel N-terminomic methodology termed TAGS-CR that can facilitate global substrate characterization in streamlined manner. We thus present the application of TAGS-CR to unravelling the human neutrophil pathodegradome of the V8 protease. In so doing, we captured ∼350 V8 targets, revealing critical insight into how this virulence factor can modulate neutrophil functionality on various levels relevant to disease progression. We recorded cleavage of proteins necessary for neutrophil adhesion and migration, a fundamental process necessary for pathogen clearance. Furthermore, we highlight V8 cleavage of proteins involved in important neutrophil defense tactics, such as degranulation and reactive oxygen species production. This protease may also facilitate bacterial dissemination via the intentional activation of neutrophil apoptosis. Collectively, this work deepens our understanding of host-pathogen interaction and begins to unravel how proteases can induce immune dysregulation through the targeting of leukocytes.

IMPORTANCE

During infection must engage and evade the host immune system in order to successfully cause disease. As neutrophils represent the frontline of defense against invading cells, it becomes increasingly important to decode how this bacterium subverts their host-defense tactics. While the contributing role to neutrophil engagement for many virulence factors have been elucidated, the effects of their proteases remain largely unclear. Here, we present a novel method for global protease substrate identification, TAGS-CR, and use it to identify V8 protease targets in human neutrophils. These include factors that not only govern general neutrophil function but moreover, their defense mechanisms, such as migration, degranulation, oxidative defense, phagocytosis and apoptosis.

摘要

未标记

是一种臭名昭著的人类病原体,它依靠一系列毒力因子来引发感染并逃避宿主免疫系统。其中包括分泌型蛋白酶,这些蛋白酶通过降解宿主蛋白和调节宿主防御来促进发病机制。人类中性粒细胞在这些防御中起关键作用,作为抵御入侵细菌的第一反应者。虽然许多毒力效应物已被证明靶向白细胞,但关于细胞外蛋白酶如何调节中性粒细胞命运的了解有限。通常,蛋白酶底物是在孤立的环境中一次使用一种方法鉴定出来的;中性粒细胞靶点很少见。在此,我们开发了一种名为TAGS-CR的新型N端蛋白质组学方法,该方法可以以简化的方式促进全局底物表征。因此,我们展示了TAGS-CR在揭示V8蛋白酶的人类中性粒细胞降解组方面的应用。通过这样做,我们捕获了约350个V8靶点,揭示了对这种毒力因子如何在与疾病进展相关的各个层面调节中性粒细胞功能的关键见解。我们记录了中性粒细胞黏附和迁移所必需的蛋白质的切割,这是病原体清除所必需的基本过程。此外,我们强调了参与重要中性粒细胞防御策略(如脱颗粒和活性氧产生)的蛋白质的V8切割。这种蛋白酶还可能通过故意激活中性粒细胞凋亡来促进细菌传播。总的来说,这项工作加深了我们对宿主-病原体相互作用的理解,并开始揭示蛋白酶如何通过靶向白细胞诱导免疫失调。

重要性

在感染期间,必须与宿主免疫系统相互作用并逃避它,以便成功引发疾病。由于中性粒细胞代表了抵御入侵细胞的第一道防线,解读这种细菌如何颠覆它们的宿主防御策略变得越来越重要。虽然许多毒力因子对中性粒细胞参与的作用已经阐明,但其蛋白酶的影响在很大程度上仍不清楚。在这里,我们提出了一种用于全局蛋白酶底物鉴定的新方法TAGS-CR,并使用它来鉴定人类中性粒细胞中的V8蛋白酶靶点。这些靶点不仅包括控制中性粒细胞一般功能的因子,还包括其防御机制,如迁移、脱颗粒、氧化防御、吞噬作用和凋亡。

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