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秘鲁乌卡亚利领西猯(Linnaeus,1758年)(猪形亚目:西猯科)完整线粒体基因组数据的特征分析

Characterization of the complete mitogenome data of collared peccary, (Linnaeus, 1758) (Suina: Tayassuidae) from Ucayali, Peru.

作者信息

Chávez-Galarza Julio César, Arévalo-Rojas Victor Manuel, Livia Gladys Luz Garay, Ferro-Mauricio Rubén Dario, Vecco Daniel, Cerna-Mendoza Agustin, Guerra-Teixeira Aldi Alida, Henriques Dora, Domínguez Fredy Fabian, Macedo-Córdova Wilder, Llanto-López Miguel Alexis

机构信息

Departamento Académico de Ciencias Básicas y Afines, Facultad de Ingeniería, Universidad Nacional de Barranca, Av. Toribio de Luzuriaga N °376, Mz J, Urbanización La Florida, Barranca, Perú.

Departamento Académico de Ingeniería, Facultad de Ingeniería, Universidad Nacional de Barranca, Av. Toribio de Luzuriaga N °376, Mz J, Urbanización La Florida, Barranca, Perú.

出版信息

Data Brief. 2024 Nov 20;57:111142. doi: 10.1016/j.dib.2024.111142. eCollection 2024 Dec.

Abstract

The collared peccary ( Linnaeus, 1758) is a vital resource for the subsistence and economy of the Amazonian inhabitants. Despite its importance, there is a notable lack of genetic information on Peruvian collared peccary populations. This study presents the complete mitogenome of from Peru, obtained by Illumina sequencing. The mitochondrial genome spans 16,836 bp and has a nucleotide composition of 34.2 % A, 25.5 % T, 13.5 % G, and 26.8 % C, with a GC content of 40.3 %. The genome includes 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and one control region. Phylogenetic analysis of protein-coding genes indicates that Peruvian is most closely related to Bolivian within the family Tayassuidae. The annotated mitogenome of Peruvian provides valuable genomic data for evolutionary research and will serve in conservation and management strategies for the species.

摘要

领西猯(林奈,1758年)是亚马逊地区居民生存和经济的重要资源。尽管其具有重要性,但关于秘鲁领西猯种群的遗传信息却明显匮乏。本研究展示了通过Illumina测序获得的来自秘鲁的完整线粒体基因组。线粒体基因组跨度为16,836 bp,核苷酸组成为34.2%的A、25.5%的T、13.5%的G和26.8%的C,GC含量为40.3%。该基因组包括13个蛋白质编码基因、22个tRNA基因、两个rRNA基因和一个控制区。对蛋白质编码基因的系统发育分析表明,秘鲁领西猯在西猯科中与玻利维亚领西猯关系最为密切。秘鲁领西猯的注释线粒体基因组为进化研究提供了有价值的基因组数据,并将用于该物种的保护和管理策略。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4e99/11648166/88b4c01c6476/gr1.jpg

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