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比较转录组分析和异源过表达表明,ZjZOG基因可能正向调控枣果实大小。

Comparative transcriptome analysis and heterologous overexpression indicate that the ZjZOG gene may positively regulate the size of jujube fruit.

作者信息

Li Meiyu, Jiao Siqian, Yao Pengqiang, Xie Yuanzhe, Yang Xiaolei, Zhang Huijin, Yao Hongju, Liu Junchao, Pang Xiaoming, Bo Wenhao, Cheng Shiping

机构信息

Henan Province Key Laboratory of Germplasm Innovation and Utilization of Eco- economic Woody Plant, Pingdingshan University, Pingdingshan, Henan, 467000, China.

National Tree Breeding Station for Platycladus orientalis in Jiaxian, Forest Farm of Jiaxian County, Jiaxian, Henan, 467100, China.

出版信息

BMC Plant Biol. 2024 Dec 28;24(1):1267. doi: 10.1186/s12870-024-05997-3.

Abstract

BACKGROUND

Fruit size is a crucial economic trait that impacts the quality of jujube (Ziziphus jujuba), however, research in this area remains limited. This study utilized two jujube cultivars with similar genetic backgrounds but differing fruit sizes to investigate the regulatory mechanisms affecting fruit size through cytological observations, transcriptome sequencing, and heterologous overexpression.

RESULTS

The findings reveal that variations in mesocarp cell numbers during early fruit development significantly influence final fruit size. Comparative transcriptome sequencing identified 16,778 differentially expressed genes across five developmental stages. Co-expression network analysis identified 16 co-expression modules. KEGG enrichment analysis of these modules indicated the significant role of plant hormone-related pathways in fruit development. A detailed analysis of the 'sky blue' module revealed candidate genes associated with the regulation of mesocarp cells, leading to the construction of a regulatory network. Heterologous overexpression of the candidate gene ZjZOG in tomato confirmed its positive role in fruit size enhancement. Transcriptomic analysis of these overexpression lines further validated the regulatory network and identified reliable candidate genes for fruit size control.

CONCLUSION

This study provides valuable insights into the regulatory mechanisms of fruit size, which may facilitate the breeding of larger jujube cultivars.

摘要

背景

果实大小是影响枣(Ziziphus jujuba)品质的关键经济性状,然而,该领域的研究仍然有限。本研究利用两个遗传背景相似但果实大小不同的枣品种,通过细胞学观察、转录组测序和异源过表达来研究影响果实大小的调控机制。

结果

研究结果表明,果实发育早期中果皮细胞数量的变化显著影响最终果实大小。比较转录组测序在五个发育阶段鉴定出16778个差异表达基因。共表达网络分析确定了16个共表达模块。对这些模块的KEGG富集分析表明植物激素相关途径在果实发育中起重要作用。对“天蓝色”模块的详细分析揭示了与中果皮细胞调控相关的候选基因,从而构建了一个调控网络。候选基因ZjZOG在番茄中的异源过表达证实了其在增大果实大小方面的积极作用。对这些过表达株系的转录组分析进一步验证了调控网络,并确定了控制果实大小的可靠候选基因。

结论

本研究为果实大小的调控机制提供了有价值的见解,这可能有助于培育更大果型的枣品种。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/cffc/11681679/64ef7457e22b/12870_2024_5997_Fig1_HTML.jpg

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