Suppr超能文献

克氏锥蝽(Le Conte,1855年)的首个全基因组序列,恰加斯病的传播媒介。

First whole-genome sequence of Triatoma sanguisuga (Le Conte, 1855), vector of Chagas disease.

作者信息

Peterson Jennifer K, MacDonald Madolyn L, Ellis Vincenzo A

机构信息

Department of Entomology and Wildlife Ecology, University of Delaware, Newark, DE 19716, USA.

Bioinformatics and Computational Biology Core, University of Delaware, Newark, DE 19716, USA.

出版信息

G3 (Bethesda). 2025 Mar 18;15(3). doi: 10.1093/g3journal/jkae308.

Abstract

Triatoma sanguisuga is the most widespread triatomine bug species in the United States. The species vectors the human parasite Trypanosoma cruzi, which causes Chagas disease. Vector-borne Chagas disease is rarely diagnosed in the United States, but T. sanguisuga has been implicated in a handful of cases. Despite its public health importance, little is known about the genomics or population genetics of T. sanguisuga. Here, we used long-read sequencing to assemble the first whole-genome sequence for T. sanguisuga using DNA extracted from 1 adult specimen from Delaware. The final size of the genome was 1.162 Gb with 77.7× coverage. The assembly consisted of 183 contigs with an N50 size of 94.97 kb. The Benchmarking Universal Single-Copy Ortholog complete score was 99.1%, suggesting a very complete assembly. Genome-wide GC content was 33.56%, and DNA methylation was 18.84%. The genome consists of 62.75% repetitive DNAs and 17,799 predicted coding genes. The assembled T. sanguisuga genome was very close in size and BUSCO score to that of Triatominae species T. dimidiata (1.16 Gb with 99.1% BUSCO score for T. sanguisuga vs 1.22 Gb with 98.7% BUSCO score for T. dimidiata) and slightly larger than that of T. infestans and Rhodnius prolixus (949 Mb with 90.4% BUSCO score and 706 Mb with 96.5% BUSCO score, respectively). The T. sanguisuga genome is the first North American triatomine species genome to be sequenced, allowing for deeper investigations into epidemiologically relevant aspects of triatomines in temperate climates, thus providing potential vector-borne disease management targets and strengthening public health preparedness.

摘要

吸血猎蝽是美国分布最广泛的锥蝽物种。该物种是人类寄生虫克氏锥虫的传播媒介,克氏锥虫可引发恰加斯病。在美国,通过媒介传播的恰加斯病很少被诊断出来,但已有少数病例与吸血猎蝽有关。尽管其对公共卫生具有重要意义,但人们对吸血猎蝽的基因组学或群体遗传学知之甚少。在此,我们使用长读长测序技术,利用从特拉华州的1只成年标本中提取的DNA,组装出了吸血猎蝽的首个全基因组序列。基因组的最终大小为1.162 Gb,覆盖度为77.7倍。该组装由183个重叠群组成,N50大小为94.97 kb。基准通用单拷贝直系同源基因完整率为99.1%,表明组装非常完整。全基因组的GC含量为33.56%,DNA甲基化率为18.84%。基因组由62.75%的重复DNA和17,799个预测的编码基因组成。组装得到的吸血猎蝽基因组在大小和BUSCO评分上与锥蝽亚科物种二色猎蝽非常接近(吸血猎蝽为1.16 Gb,BUSCO评分为99.1%;二色猎蝽为1.22 Gb,BUSCO评分为98.7%),且略大于侵扰锥猎蝽和南美锥蝽(分别为949 Mb,BUSCO评分为90.4%;706 Mb,BUSCO评分为96.5%)。吸血猎蝽基因组是首个被测序的北美锥蝽物种基因组,这使得对温带气候下锥蝽在流行病学相关方面的研究更加深入,从而提供了潜在的媒介传播疾病管理靶点,并加强了公共卫生防范能力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ae40/11917478/0ad2adf87f62/jkae308f1.jpg

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验