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一种通过定量构效关系建模、化学图论和多标准决策分析进行多发性硬化症药物设计的计算方法。

A computational approach to drug design for multiple sclerosis via QSPR modeling, chemical graph theory, and multi-criteria decision analysis.

作者信息

Farooq Fozia Bashir, Idrees Nazeran, Noor Esha, Alqahtani Nouf Abdulrahman, Imran Muhammad

机构信息

Department of Mathematics and Statistics, College of Science, Imam Mohammad Ibn Saud Islamic University (IMSIU), Riyadh, 11564, Saudi Arabia.

Department of Mathematics, Government College University Faisalabad, Faisalabad, 38000, Pakistan.

出版信息

BMC Chem. 2025 Jan 2;19(1):1. doi: 10.1186/s13065-024-01374-1.

Abstract

Multiple sclerosis (MS) is a complex autoimmune disease of the central nervous system with an unknown etiology. While disease-modifying therapies can slow progression, there is a need for more effective treatments. Quantitative structure-activity relationship (QSAR) modeling using topological indices derived from chemical graph theory is a promising approach to rationally design new drugs for MS. Using a linear regression approach, we create models for Quantitative Structure-Property Relations (QSPR), detecting correlations between properties such as enthalpy of vaporization, flash point, molar weight, polarizability, molar volume, and complexity with certain degree related topological indices. We used a dataset related to drugs for MS with known properties for training the model and also for validation. To prioritize the most promising drug candidates, we used multi-criteria decision making based on the predicted properties and topological indices, allowing for more informed decisions. The 12 drug candidates were prioritized using the Technique for Order of Preference by Similarity to Ideal Solution (TOPSIS) and two Weighted Aggregated Sum Product Assessment (WASPAS) methods. The rankings obtained using TOPSIS, WASPAS methods showed a high level of agreement among the results. This framework can be broadly applied to rationally design new therapeutics for complex diseases.

摘要

多发性硬化症(MS)是一种病因不明的中枢神经系统复杂自身免疫性疾病。虽然疾病修饰疗法可以减缓疾病进展,但仍需要更有效的治疗方法。使用源自化学图论的拓扑指数进行定量构效关系(QSAR)建模是一种合理设计治疗MS新药的有前景的方法。我们采用线性回归方法创建定量结构-性质关系(QSPR)模型,检测诸如汽化焓、闪点、摩尔质量、极化率、摩尔体积和复杂度等性质与特定程度相关拓扑指数之间的相关性。我们使用了一个与具有已知性质的MS药物相关的数据集来训练模型并进行验证。为了对最有前景的候选药物进行优先级排序,我们基于预测性质和拓扑指数使用多标准决策方法,从而做出更明智的决策。使用理想解相似排序法(TOPSIS)和两种加权聚合和乘积评估(WASPAS)方法对12种候选药物进行了优先级排序。使用TOPSIS、WASPAS方法获得的排名结果之间显示出高度一致性。该框架可广泛应用于合理设计针对复杂疾病的新疗法。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/8478/11697749/0194dd3306e3/13065_2024_1374_Fig1_HTML.jpg

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