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[核糖体30S亚颗粒的四级结构:模型及其实验验证]

[Quaternary structure of the ribosomal 30S subparticle: the model and its experimental verification].

作者信息

Spirin A S, Serdiuk I N, Shpungin I L, Vasil'ev V D

出版信息

Mol Biol (Mosk). 1979 Nov-Dec;13(6):1384-96.

PMID:398003
Abstract

In considering the structure of the ribosomal 30S subparticle from Escherichia coli we have assumed that : 1) all or almost all the proteins in the 30S subparticle are compact and globular as has been shown for isolated proteins S4, S7, S8, S15 and S16 in solution [Serdyuk I. N., Zaccai G. and Spirin A. S. (1978) FEBS Letters, 94, 349-352]; 2) RNA within the 30S subparticle has the same specific V-like or Y-like shape demonstrated for the isolated 16S RNA in a compact conformation [Vasiliev V. D., Selivanova O. M. and Koteliansky V. E. (1978) FEBS Letters, 95, 273-276]. On the basis of this assumption and numerous data published on the mutual localization of ribosomal proteins, we have constructed a model of the quaternary structure of the ribosomal 30S subparticle. We have tested the model by comparing the theoretically calculated curves of neutron and X-ray scattering at different contrasts with the corresponding experimental scattering curves of the E. coli 30S subparticles and have found that they coincide. The calculated scattering curves of several previously published three-dimensional diagrams of protein topography in the 30S subparticle do not agree with experiment.

摘要

在研究大肠杆菌核糖体30S亚基的结构时,我们假设:1)30S亚基中的所有或几乎所有蛋白质都是紧密的球状,这已在溶液中对分离出的蛋白质S4、S7、S8、S15和S16所做的研究中得到证实[塞尔久克I.N.、扎凯G.和斯皮林A.S.(1978年)《欧洲生物化学学会联合会快报》,94,349 - 352];2)30S亚基内的RNA具有与紧密构象的分离16S RNA所显示的相同的特定V形或Y形[瓦西里耶夫V.D.、谢利瓦诺娃O.M.和科捷良斯基V.E.(1978年)《欧洲生物化学学会联合会快报》,95,273 - 276]。基于这一假设以及关于核糖体蛋白质相互定位所发表的大量数据,我们构建了核糖体30S亚基四级结构的模型。我们通过将不同对比度下中子和X射线散射的理论计算曲线与大肠杆菌30S亚基相应的实验散射曲线进行比较来测试该模型,结果发现它们是吻合的。之前发表的30S亚基中蛋白质拓扑结构的几个三维图的计算散射曲线与实验结果不一致。

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