Wang Zhantong, Liu Wei, Bai Ruoxue, Guo Yaotao, Wang Zhigang, Ma Xianjie, Yu Zhou
Department of Plastic Surgery, Xijing Hospital, Fourth Military Medical University, Xi'an, Shaanxi Province 710032, China; Xijing 986 Hospital Department, Fourth Military Medical University, Xi'an, Shaanxi Province 710032, China.
Department of Plastic Surgery, Xijing Hospital, Fourth Military Medical University, Xi'an, Shaanxi Province 710032, China.
Gene. 2025 Apr 5;943:149267. doi: 10.1016/j.gene.2025.149267. Epub 2025 Jan 20.
Mechanical stretch is utilized in the process of tissue expansion to promote skin regeneration, which is crucial for wound healing and organ reconstruction purposes. Enlarged dermal area is one of the significant histological characteristics of the expanded skin. However, the underlying biological processes and molecular pathways associated with dermal regeneration triggered by mechanical stretch are still not well understood.
Twelve male Sprague-Dawley (SD) rats were divided into the expansion group and sham group randomly. Upon creating a rat scalp expansion model, the dermis was isolated from the full-thickness skin in both experimental groups for RNA sequencing. This process led to the identification of differentially expressed genes (DEGs). Subsequently, we conducted Gene Ontology (GO) analysis, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis, and Gene Set Enrichment Analysis (GSEA) to identify the essential biological processes associated with dermal regeneration induced by mechanical stretch, leveraging data from the DEGs. A network of protein-protein interactions (PPI) was built to detect the critical modules and central genes. The expression levels of these hub genes were evaluated using quantitative real-time polymerase chain reaction (qPCR).
Increased expanded skin area and dermal thinning which represent the typical changes of expanded skin were observed in the expansion group. A total of 782 DEGs were identified in the expansion group relative to the sham group. The DEGs were associated with several biological processes, including the organization of the extracellular matrix, the enhancement of macrophage activation, and the promotion of angiogenesis, among others. Cell components encompassing Toll-like receptor 2-Toll-like receptor 6 protein complex, interstitial matrix, extracellular matrix (ECM), and collagen trimer were discovered. Molecular function categories including integrin binding, insulin-like growth factor binding, and fatty acid elongase activity were involved. The KEGG pathway analysis demonstrated the significant enrichment of pathways including the PI3K-Akt signaling pathway, fatty acid metabolism, and extracellular matrix-receptor interactions. GSEA results displayed that mechanical stretch correlated with the regulation of cell activation processes, cytokine-mediated signaling pathways, and immune system processes. PPI network resulted in the identification of 598 nodes along with a total of 5,304 interaction pairs between proteins. And ten hub genes containing Ccl2, Cxcl10, Fasn, Itgad, Cd163, Mmp9, Cd36, Tlr2, Igf1, and Wnt2 were identified by bioinformatics analysis and validated by qPCR.
This in vivo study for the first time revealed the DEGs related to mechanical stretch stimulated dermal regeneration and identified the involved pathways and hub genes correlated with macrophage recruitment and polarization, fibroblast proliferation and ECM production and angiogenesis, which may benefit further studies aimed at developing therapeutic strategies for facilitating expanded skin regeneration.
在组织扩张过程中利用机械拉伸来促进皮肤再生,这对于伤口愈合和器官重建至关重要。扩大的真皮面积是扩张皮肤的重要组织学特征之一。然而,由机械拉伸触发的与真皮再生相关的潜在生物学过程和分子途径仍未得到充分了解。
将12只雄性Sprague-Dawley(SD)大鼠随机分为扩张组和假手术组。建立大鼠头皮扩张模型后,从两个实验组的全层皮肤中分离真皮用于RNA测序。此过程导致了差异表达基因(DEG)的鉴定。随后,我们进行了基因本体(GO)分析、京都基因与基因组百科全书(KEGG)通路分析和基因集富集分析(GSEA),以利用DEG数据确定与机械拉伸诱导的真皮再生相关的重要生物学过程。构建了蛋白质-蛋白质相互作用(PPI)网络以检测关键模块和中心基因。使用定量实时聚合酶链反应(qPCR)评估这些枢纽基因的表达水平。
在扩张组中观察到代表扩张皮肤典型变化的扩张皮肤面积增加和真皮变薄。相对于假手术组,扩张组共鉴定出782个DEG。这些DEG与多个生物学过程相关,包括细胞外基质的组织、巨噬细胞活化的增强和血管生成的促进等。发现了包含Toll样受体2-Toll样受体6蛋白复合物、间质基质、细胞外基质(ECM)和胶原三聚体的细胞成分。涉及整合素结合、胰岛素样生长因子结合和脂肪酸延长酶活性等分子功能类别。KEGG通路分析表明包括PI3K-Akt信号通路、脂肪酸代谢和细胞外基质-受体相互作用等通路的显著富集。GSEA结果显示机械拉伸与细胞活化过程、细胞因子介导的信号通路和免疫系统过程的调节相关。PPI网络导致鉴定出598个节点以及蛋白质之间总共5304个相互作用对。通过生物信息学分析鉴定出十个枢纽基因,包括Ccl2、Cxcl10、Fasn、Itgad、Cd163、Mmp9、Cd36、Tlr2、Igf1和Wnt2,并通过qPCR进行了验证。
这项体内研究首次揭示了与机械拉伸刺激的真皮再生相关的DEG,并确定了与巨噬细胞募集和极化、成纤维细胞增殖以及ECM产生和血管生成相关的涉及通路和枢纽基因,这可能有利于进一步开展旨在开发促进扩张皮肤再生治疗策略的研究。