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基于转录组测序的妊娠期糖尿病胎盘组织转录本变化

Transcript Changes of Placental Tissue in Gestational Diabetes Mellitus Based on Transcriptome Sequencing.

作者信息

Sun Yun, Wang Yi, Liu Chao, Yang Jie, Li Qinwen, Zhao Fei

机构信息

Department of Obstetrics, The Affiliated Taian City Central Hospital of Qingdao University, Taian, People's Republic of China.

Department of Obstetrics, Taian Maternal and Child Care Health Hospital, Taian, People's Republic of China.

出版信息

Diabetes Metab Syndr Obes. 2025 Jan 25;18:197-208. doi: 10.2147/DMSO.S479803. eCollection 2025.

Abstract

PURPOSE

This study aims to identify key genes that may be involved in the pathogenesis of gestational diabetes mellitus and to preliminarily elucidate the underlying mechanisms.

METHODS

High-throughput transcriptome sequencing was employed to identify Differentially expressed genes (DEGs) in placental tissue samples of GDM and normal pregnant women. Functional and pathway analyses of these DEGs were conducted using bioinformatics databases. Significant DEGs were validated through real-time quantitative PCR in conjunction with relevant literature.

RESULTS

In comparison to the normal pregnancy group, 435 DEGs were identified in the GDM group, comprising 128 upregulated and 307 downregulated genes. GO enrichment analysis revealed that DEGs were primarily associated with biological processes, such as cellular processes, biological regulation, regulation of biological processes, and response to stimuli. Cell component enrichment analysis indicated their association with cellular anatomical entities and protein-containing complexes. Molecular function enrichment analysis highlighted their roles in binding and catalytic activities. KEGG pathway enrichment analysis indicated the involvement of DEGs in signalling pathways related to PI3K-Akt signaling pathway and ECM-receptor interaction. qRT-PCR validation of five randomly selected DEGs confirmed consistent expression trends with RNA-Seq quantification.

CONCLUSION

YWHAB, LEP, CCL21, PAPPA2, and SFN may be potential biological markers for the diagnosis of GDM, involved in the occurrence and development of GDM, and have certain value for disease prediction and diagnosis.

摘要

目的

本研究旨在鉴定可能参与妊娠期糖尿病发病机制的关键基因,并初步阐明其潜在机制。

方法

采用高通量转录组测序技术,鉴定妊娠期糖尿病孕妇和正常孕妇胎盘组织样本中的差异表达基因(DEGs)。利用生物信息学数据库对这些DEGs进行功能和通路分析。通过实时定量PCR结合相关文献对显著的DEGs进行验证。

结果

与正常妊娠组相比,妊娠期糖尿病组共鉴定出435个DEGs,其中上调基因128个,下调基因307个。基因本体(GO)富集分析显示,DEGs主要与生物学过程相关,如细胞过程、生物调节、生物过程调节和对刺激的反应。细胞成分富集分析表明它们与细胞解剖实体和含蛋白质复合物有关。分子功能富集分析突出了它们在结合和催化活性方面的作用。京都基因与基因组百科全书(KEGG)通路富集分析表明,DEGs参与了与PI3K-Akt信号通路和细胞外基质-受体相互作用相关的信号通路。对随机选择的5个DEGs进行qRT-PCR验证,证实其表达趋势与RNA测序定量结果一致。

结论

YWHAB、LEP、CCL21、PAPPA2和SFN可能是妊娠期糖尿病诊断的潜在生物标志物,参与妊娠期糖尿病的发生发展,对疾病预测和诊断具有一定价值。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4c9f/11776396/8a64489a936e/DMSO-18-197-g0001.jpg

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