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基于短肽的金属酶的途径依赖性催化活性:从混杂活性到级联反应

Pathway-Dependent Catalytic Activity of Short-Peptide-Based Metallozyme: From Promiscuous Activity to Cascade Reaction.

作者信息

Mahato Chiranjit, Pal Sumit, Kuiry Himangshu, Das Dibyendu

机构信息

Department of Chemical Sciences & Centre for Advanced Functional Materials, Indian Institute of Science Education and Research (IISER) Kolkata, Mohanpur, West Bengal 741246, India.

出版信息

Nano Lett. 2025 Feb 12;25(6):2538-2546. doi: 10.1021/acs.nanolett.4c06230. Epub 2025 Feb 2.

Abstract

Many natural enzymes contain metal ions as cofactors in the active site for biological activity. However, the pathway of the introduction of metal ions in the earliest protein folds for the emergence of higher catalytic activity remains an intriguing open question. Herein, we demonstrate that pathway-dependent self-assembly of short-peptide-based metallozymes results in differences in catalytic activity. Short-peptide-based amyloids with solvent exposed arrays of colocalized catalytic units are able to bind highly soluble Cu ions to demonstrate oxidase-like and RNase-like activity (promiscuity). Further, the metallozyme was able to exhibit higher hydrolase-oxidase cascade activity compared to the mixture of natural enzymes, esterase, and laccase. The collaboration between short-peptide-based amyloid microphases and metal ions suggests that metallozymes might have played a pivotal role in early metabolic processes and biopolymer evolution on the prebiotic earth.

摘要

许多天然酶在活性位点含有金属离子作为生物活性的辅因子。然而,在最早的蛋白质折叠中引入金属离子以产生更高催化活性的途径仍然是一个有趣的开放性问题。在此,我们证明基于短肽的金属酶的途径依赖性自组装导致催化活性的差异。具有溶剂暴露的共定位催化单元阵列的基于短肽的淀粉样蛋白能够结合高度可溶的铜离子以表现出氧化酶样和核糖核酸酶样活性(混杂性)。此外,与天然酶、酯酶和漆酶的混合物相比,该金属酶能够表现出更高的水解酶 - 氧化酶级联活性。基于短肽的淀粉样微相和金属离子之间的协同作用表明,金属酶可能在早期代谢过程和前生物地球上的生物聚合物进化中发挥了关键作用。

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