Douglas Tyler E, Márquez Roberto, Holmes V Renee, Johnston J Spencer, Tarvin Rebecca D
Museum of Vertebrate Zoology and Department of Integrative Biology, University of California, Berkeley, CA, United States.
Department of Biological Sciences, Virginia Tech, Blacksburg, VA, United States.
Evolution. 2025 May 14;79(5):698-710. doi: 10.1093/evolut/qpaf011.
Adaptive and neutral processes have produced a spectrum of genome sizes across organisms. Amphibians in particular possess a wide range in C-values, from <1 to over 125 pg. However, the genome size of most amphibians is unknown, and no single family has been comprehensively assessed. We provide new estimates for 32 poison frog species representing the major lineages within Dendrobatidae using Feulgen staining of museum specimens and flow cytometry of fresh tissue. We show that genome size in Dendrobatidae has likely evolved gradually, with potential evolutionary rate shifts in the genera Phyllobates and Hyloxalus, which respectively possess species with the largest (13.0 pg) and second smallest (2.6 pg) genomes in the family. Phylogenetically controlled regression analyses indicate that genome size is positively correlated with snout-vent length, oocyte number, and clutch size, but negatively correlated with active metabolic rate and metabolic scope. While body size and metabolic rate are also correlates of toxicity, we found no relationship between genome size and evolution of chemical defense within Dendrobatidae. Genome size evolution in Dendrobatidae provides insight into the processes shaping genome size evolution over short timescales and establishes a novel system in which to study the mechanistic links between genome size and organismal physiology.
适应性和中性过程在生物体中产生了一系列基因组大小。特别是两栖动物的C值范围很广,从小于1皮克到超过125皮克。然而,大多数两栖动物的基因组大小未知,且尚无单个科被全面评估。我们利用博物馆标本的福尔根染色和新鲜组织的流式细胞术,对代表箭毒蛙科内主要谱系的32种箭毒蛙物种进行了新的估计。我们表明,箭毒蛙科的基因组大小可能是逐渐进化的,在叶毒蛙属和溪毒蛙属中可能存在进化速率的变化,这两个属分别拥有该科中基因组最大(13.0皮克)和第二小(2.6皮克)的物种。系统发育控制回归分析表明,基因组大小与吻肛长度、卵母细胞数量和窝卵数呈正相关,但与活跃代谢率和代谢范围呈负相关。虽然体型和代谢率也与毒性相关,但我们发现箭毒蛙科内基因组大小与化学防御的进化之间没有关系。箭毒蛙科的基因组大小进化为短时间尺度上塑造基因组大小进化的过程提供了见解,并建立了一个新的系统来研究基因组大小与生物体生理学之间的机制联系。