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一个能够降解聚乙烯的富集细菌群落的基因组见解和代谢途径

Genomic insights and metabolic pathways of an enriched bacterial community capable of degrading polyethylene.

作者信息

Li Qihao, Li Huixin, Tian Li, Wang Yicheng, Ouyang Zeping, Li Liguan, Mao Yanping

机构信息

College of Chemistry and Environmental Engineering, Shenzhen University, Shenzhen, Guangdong 518071, China.

Department of Science and Environmental Studies, The Education University of Hong Kong, Hong Kong SAR, China.

出版信息

Environ Int. 2025 Mar;197:109334. doi: 10.1016/j.envint.2025.109334. Epub 2025 Feb 15.

Abstract

In the face of mounting global plastic pollution, especially concerning microplastics, biodegradation must be a sustainable solution. The key factor driving this technology is to explore efficient plastic-biodegraders from different habitats, among which activated sludge (AS) may be an important option since it holds diverse microorganisms occupying various ecological niches. Here we intend to enrich the plastic-degrading microorganisms from AS by using polyethylene (PE) plastic as the carbon and energy source. After a 28-day incubation, the weight loss of PE films reached 3% and the hydrophobicity decreased, indicating physical biodegradation. Moreover, Fourier-transform infrared spectroscopy (FTIR) results showed the formation of several new oxygen-containing functional groups on PE. Microbial analysis extracted 26 metagenome-assembled genomes (MAGs) from the enriched microbial communities. Among them MAG10, MAG21 and MAG26 displayed the increased abundance upon PE addition and harbored abundant genes related to carbohydrate transport and metabolism, suggesting their potential to degrade PE. Additionally, functional analysis revealed 14 plastic degradation-related genes, including oxidase, laccase, and lipase, indicating the significant potential in plastic degradation. Furthermore, a pathway for synergistic biodegradation of PE was proposed based on the potential PE degradation genes retrieved from MAGs. This work offers a promising and sustainable solution to plastic pollution by enriching the potential biodegraders from AS.

摘要

面对日益严重的全球塑料污染,尤其是微塑料问题,生物降解必须是一种可持续的解决方案。推动这项技术的关键因素是从不同栖息地探索高效的塑料降解菌,其中活性污泥(AS)可能是一个重要选择,因为它含有占据各种生态位的多种微生物。在这里,我们打算以聚乙烯(PE)塑料作为碳源和能源,从活性污泥中富集塑料降解微生物。经过28天的培养,PE薄膜的重量损失达到3%,疏水性降低,表明发生了物理生物降解。此外,傅里叶变换红外光谱(FTIR)结果显示PE上形成了几个新的含氧官能团。微生物分析从富集的微生物群落中提取了26个宏基因组组装基因组(MAG)。其中,MAG10、MAG21和MAG26在添加PE后丰度增加,并含有与碳水化合物运输和代谢相关的丰富基因,表明它们具有降解PE的潜力。此外,功能分析揭示了14个与塑料降解相关的基因,包括氧化酶、漆酶和脂肪酶,表明其在塑料降解方面具有巨大潜力。此外,基于从MAG中检索到的潜在PE降解基因,提出了一条PE协同生物降解途径。这项工作通过从活性污泥中富集潜在的生物降解菌,为塑料污染提供了一个有前景的可持续解决方案。

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