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超越CHD7基因:揭示临床疑似CHARGE综合征的遗传多样性。

Beyond CHD7 gene: unveiling genetic diversity in clinically suspected CHARGE syndrome.

作者信息

Kim Dohyung, Yoon Ji-Hee, Bae Hyunwoo, Hwang Soojin, Seo Go Hun, Koh June-Young, Ju Young Seok, Do Hyo-Sang, Kim Soyoung, Choi In Hee, Kim Gu-Hwan, Kim Ja Hye, Choi Jin-Ho, Lee Beom Hee

机构信息

Department of Pediatrics, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.

Medical Genetics Center, Asan Medical Center, University of Ulsan College of Medicine, Seoul, Republic of Korea.

出版信息

J Hum Genet. 2025 May;70(5):243-248. doi: 10.1038/s10038-025-01325-1. Epub 2025 Feb 25.

DOI:10.1038/s10038-025-01325-1
PMID:40000719
Abstract

The Verloes or Hale diagnostic criteria have been applied for diagnosing CHARGE syndrome in suspected patients. This study was conducted to evaluate the diagnostic rate of CHD7 according to these diagnostic criteria in suspected patients and also to investigate other genetic defects in CHD7-negative patients. The clinical findings and the results of genetic testing of CHD7, chromosome microarray, exome sequencing, or genome sequencing of 59 subjects were reviewed. CHD7 pathogenic variants were identified in 78% of 46 subjects who met either the Verloes or Hale diagnostic criteria and in 87% of 38 subjects who met both criteria, whereas no CHD7 variant was detected in 13 subjects who met neither criterion. Among 23 patients without the CHD7 variant, six genetic diseases were identified in 7 patients, including Wolf-Hirschhorn syndrome, 1q21 deletion syndrome, 19q13 microdeletion, and pathogenic variants in PLCB4, TRRAP, and OTX2. Based on these comprehensive analyses, the overall diagnostic rate was 73% for seven different genetic diseases. This study emphasizes the importance of comprehensive clinical and genetic evaluation in patients with clinically suspected CHARGE syndrome, recognizing the overlapping phenotypes in other rare genetic disorders.

摘要

Verloes或Hale诊断标准已应用于疑似CHARGE综合征患者的诊断。本研究旨在根据这些诊断标准评估疑似患者中CHD7的诊断率,并调查CHD7阴性患者中的其他基因缺陷。回顾了59名受试者的临床发现以及CHD7的基因检测结果、染色体微阵列、外显子组测序或基因组测序结果。在符合Verloes或Hale诊断标准的46名受试者中,78%鉴定出CHD7致病变体;在符合两项标准的38名受试者中,87%鉴定出CHD7致病变体;而在不符合任何一项标准的13名受试者中未检测到CHD7变体。在23名无CHD7变体的患者中,7名患者鉴定出6种遗传疾病,包括Wolf-Hirschhorn综合征、1q21缺失综合征、19q13微缺失以及PLCB4、TRRAP和OTX2中的致病变体。基于这些综合分析,7种不同遗传疾病的总体诊断率为73%。本研究强调了对临床疑似CHARGE综合征患者进行全面临床和基因评估的重要性,同时认识到其他罕见遗传疾病中存在重叠表型。

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Beyond CHD7 gene: unveiling genetic diversity in clinically suspected CHARGE syndrome.超越CHD7基因:揭示临床疑似CHARGE综合征的遗传多样性。
J Hum Genet. 2025 May;70(5):243-248. doi: 10.1038/s10038-025-01325-1. Epub 2025 Feb 25.
2
Feeding difficulty is the dominant feature in 12 Chinese newborns with CHD7 pathogenic variants.喂养困难是12名携带CHD7致病变异的中国新生儿的主要特征。
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引用本文的文献

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Novel biallelic CDK9 variants are associated with retinal dystrophy without CHARGE-like malformation syndrome.新型双等位基因CDK9变异与无CHARGE样畸形综合征的视网膜营养不良相关。
J Hum Genet. 2025 Sep 16. doi: 10.1038/s10038-025-01395-1.

本文引用的文献

1
Phenotypic characteristics and variability in CHARGE syndrome: a PRISMA compliant systematic review and meta-analysis.CHARGE 综合征的表型特征和变异性:一项符合 PRISMA 标准的系统评价和荟萃分析。
J Neurodev Disord. 2022 Aug 31;14(1):49. doi: 10.1186/s11689-022-09459-5.
2
Expanding the Clinical Phenotype of 19q Interstitial Deletions: A New Case with 19q13.32-q13.33 Deletion and Short Review of the Literature.扩展 19q 染色体间区缺失的临床表型:一个新的 19q13.32-q13.33 缺失病例及文献复习。
Genes (Basel). 2022 Jan 24;13(2):212. doi: 10.3390/genes13020212.
3
The phenotypic spectrum associated with OTX2 mutations in humans.
与人类 OTX2 突变相关的表型谱。
Eur J Endocrinol. 2021 May 25;185(1):121-135. doi: 10.1530/EJE-20-1453.
4
Genetics of syndromic ocular coloboma: CHARGE and COACH syndromes.综合征性眼窝缺损的遗传学:CHARGE 和 COACH 综合征。
Exp Eye Res. 2020 Apr;193:107940. doi: 10.1016/j.exer.2020.107940. Epub 2020 Feb 4.
5
International meeting on Wolf-Hirschhorn syndrome: Update on the nosology and new insights on the pathogenic mechanisms for seizures and growth delay.国际 Wolf-Hirschhorn 综合征会议:疾病分类学的最新进展及癫痫发作和生长迟缓发病机制的新见解。
Am J Med Genet A. 2020 Jan;182(1):257-267. doi: 10.1002/ajmg.a.61406. Epub 2019 Nov 25.
6
The Molecular Basis of Human Anophthalmia and Microphthalmia.人类无眼症和小眼症的分子基础
J Dev Biol. 2019 Aug 14;7(3):16. doi: 10.3390/jdb7030016.
7
Missense Variants in the Histone Acetyltransferase Complex Component Gene TRRAP Cause Autism and Syndromic Intellectual Disability.组蛋白乙酰转移酶复合物成分基因 TRRAP 中的错义变异导致自闭症和综合征性智力残疾。
Am J Hum Genet. 2019 Mar 7;104(3):530-541. doi: 10.1016/j.ajhg.2019.01.010. Epub 2019 Feb 28.
8
Genetic analysis of CHARGE syndrome identifies overlapping molecular biology.CHARGE 综合征的遗传学分析确定了重叠的分子生物学。
Genet Med. 2018 Sep;20(9):1022-1029. doi: 10.1038/gim.2017.233. Epub 2018 Jan 4.
9
Phenotypic expression of 19q13.32 microdeletions: Report of a new patient and review of the literature.19q13.32微缺失的表型表达:一例新患者报告及文献复习
Am J Med Genet A. 2017 Jul;173(7):1970-1974. doi: 10.1002/ajmg.a.38256. Epub 2017 Apr 14.
10
Cerebellar vermis hypoplasia in CHARGE syndrome: clinical and molecular characterization of 18 unrelated Korean patients.CHARGE综合征中的小脑蚓部发育不全:18例非相关韩国患者的临床和分子特征
J Hum Genet. 2016 Mar;61(3):235-9. doi: 10.1038/jhg.2015.135. Epub 2015 Nov 5.