Kumar Boddupalli Venkata Siva, Talamadla Mahesh Kumar, Nandikolla Adinarayana, Khetmalis Yogesh Mahadu, Shetye Gauri, Franzblau Scott G, Murugesan Sankaranarayanan, Sekhar Kondapalli Venkata Gowri Chandra
Department of Chemistry, Birla Institute of Technology and Science, Pilani, Hyderabad Campus, Jawahar Nagar, Kapra Mandal, Hyderabad 500078, Telangana, India.
Institute for Tuberculosis Research, College of Pharmacy, University of Illinois at Chicago, 833 South Wood Street, Chicago, IL 60612, USA.
Bioorg Med Chem Lett. 2025 Jun 1;121:130177. doi: 10.1016/j.bmcl.2025.130177. Epub 2025 Mar 8.
In this work, novel 2-substituted-3-((1-substituted-1H-1,2,3-triazol-4-yl) methoxy) quinoxaline analogues were designed, synthesized, and various analytical techniques, viz., H NMR, C NMR, and Mass spectrometry, were deployed in the structure confirmation of the final compounds. Synthesized derivatives were evaluated for their antimycobacterial activity against Mycobacterium tuberculosis (Mtb) H37Rv. Target molecules mainly consist of methyl substituent in the second position of quinoxaline moiety (QM series) or phenyl substituent in the second position (QP series). Among the forty-two compounds synthesized and evaluated for anti-mycobacterial activity, the MIC values ranged between 5.58 μg/mL to >100 μg/mL. Among QM series compounds, QM7, with MIC 5.58 μg /mL, was the most active compound. Among the QP series derivatives, the intermediate QP-Acy with MIC 23.39 μg /mL was the most promising. Most of the analogues tested in the QP series are less potent than the QM series. All the synthesized molecules showed good drug-likeness when evaluated using the SWISS ADME tool. QM7 was evaluated for docking studies using the crystal structure of enoyl-acyl carrier (INH-A) enzyme PDB: 4TZK, and it showed significant docking scores and interactions. MD simulations were carried out to assess the stability of the protein QM7 complex. Single crystals were grown for QM1, QM6, and QPb from these forty-two compounds, and their structures were solved using OLEX. The corresponding CCDC numbers for these compounds are 2,388,310, 2,388,309, and 2,388,291, respectively.
在本研究中,设计并合成了新型的2-取代-3-((1-取代-1H-1,2,3-三唑-4-基)甲氧基)喹喔啉类似物,并运用多种分析技术,即氢核磁共振(¹H NMR)、碳核磁共振(¹³C NMR)和质谱,对最终化合物进行结构确证。对合成的衍生物针对结核分枝杆菌(Mtb)H37Rv的抗分枝杆菌活性进行了评估。目标分子主要由喹喔啉部分(QM系列)第二位的甲基取代基或第二位的苯基取代基(QP系列)组成。在合成并评估抗分枝杆菌活性的42种化合物中,最低抑菌浓度(MIC)值在5.58 μg/mL至>100 μg/mL之间。在QM系列化合物中,MIC为5.58 μg /mL的QM7是活性最高的化合物。在QP系列衍生物中,MIC为23.39 μg /mL的中间体QP-Acy最具潜力。QP系列中测试的大多数类似物活性低于QM系列。使用SWISS ADME工具评估时,所有合成分子均显示出良好的类药性。使用烯酰基-酰基载体(INH-A)酶的晶体结构PDB: 4TZK对QM7进行对接研究,结果显示其对接分数和相互作用显著。进行分子动力学(MD)模拟以评估蛋白质-QM7复合物的稳定性。从这42种化合物中培养出了QM1、QM6和QPb的单晶,并使用OLEX解析了它们的结构。这些化合物对应的剑桥晶体学数据中心(CCDC)编号分别为2,388,310、2,388,309和2,388,291。