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微卫星稳定的BRAF突变型结直肠癌的综合代谢组学和表观基因组学特征分析

Comprehensive metabolomic and epigenomic characterization of microsatellite stable BRAF-mutated colorectal cancer.

作者信息

Taira Aurora, Aavikko Mervi, Katainen Riku, Kaasinen Eevi, Välimäki Niko, Ravantti Janne, Ristimäki Ari, Seppälä Toni T, Renkonen-Sinisalo Laura, Lepistö Anna, Tahkola Kyösti, Mattila Anne, Koskensalo Selja, Mecklin Jukka-Pekka, Böhm Jan, Bramsen Jesper Bertram, Andersen Claus Lindbjerg, Palin Kimmo, Rajamäki Kristiina, Aaltonen Lauri A

机构信息

Medicum/Department of Medical and Clinical Genetics, University of Helsinki, Helsinki, 00014, Finland.

Applied Tumor Genomics Research Program, Research Programs Unit, University of Helsinki, Helsinki, 00014, Finland.

出版信息

Oncogene. 2025 Mar 18. doi: 10.1038/s41388-025-03326-y.


DOI:10.1038/s41388-025-03326-y
PMID:40102611
Abstract

Oncogenic codon V600E mutations of the BRAF gene affect 10-15% of colorectal cancers, resulting in activation of the MAPK/ERK signaling pathway and increased cell proliferation and survival. BRAF-mutated colorectal tumors are often microsatellite unstable and characterized by high DNA methylation levels. However, the mechanistic link between BRAF mutations and hypermethylation remains controversial. Understanding this link, particularly in microsatellite stable tumors is of great interest as these often show poor survival. We characterized the metabolomic, epigenetic and transcriptomic patterns of altogether 39 microsatellite stable BRAF-mutated colorectal cancers. Metabolomic analysis of tumor tissue showed low levels of vitamin C and its metabolites in BRAF-mutated tumors. Gene expression analysis indicated dysregulation of vitamin C antioxidant activity in these lesions. As vitamin C is an important cofactor for the activity of TET DNA demethylase enzymes, low vitamin C levels could directly contribute to the high methylation levels in these tumors by decreasing enzymatic TET activity. Vitamin C transporter gene SLC23A1 expression, as well as vitamin C metabolite levels, were inversely correlated with DNA methylation levels. This work proposes a new mechanistic link between BRAF mutations and hypermethylation, inspiring further work on the role of vitamin C in the genesis of BRAF-mutated colorectal cancer.

摘要

BRAF基因的致癌密码子V600E突变影响10%-15%的结直肠癌,导致MAPK/ERK信号通路激活,细胞增殖和存活增加。BRAF突变的结直肠肿瘤通常微卫星不稳定,其特征是DNA甲基化水平高。然而,BRAF突变与高甲基化之间的机制联系仍存在争议。了解这种联系,特别是在微卫星稳定的肿瘤中,具有极大的研究价值,因为这些肿瘤往往预后较差。我们对总共39例微卫星稳定的BRAF突变型结直肠癌的代谢组学、表观遗传学和转录组学模式进行了表征。肿瘤组织的代谢组学分析显示,BRAF突变型肿瘤中维生素C及其代谢物水平较低。基因表达分析表明,这些病变中维生素C抗氧化活性失调。由于维生素C是TET DNA脱甲基酶活性的重要辅助因子,低维生素C水平可能通过降低TET酶活性直接导致这些肿瘤中的高甲基化水平。维生素C转运蛋白基因SLC23A1的表达以及维生素C代谢物水平与DNA甲基化水平呈负相关。这项研究提出了BRAF突变与高甲基化之间一种新的机制联系,为进一步研究维生素C在BRAF突变型结直肠癌发生中的作用提供了思路。

相似文献

[1]
Comprehensive metabolomic and epigenomic characterization of microsatellite stable BRAF-mutated colorectal cancer.

Oncogene. 2025-3-18

[2]
Loss of heterozygosity, aberrant methylation, BRAF mutation and KRAS mutation in colorectal signet ring cell carcinoma.

Mod Pathol. 2012-4-20

[3]
Somatic BRAF-V600E mutations in familial colorectal cancer.

Cancer Epidemiol Biomarkers Prev. 2006-11

[4]
High frequency of genes' promoter methylation, but lack of BRAF V600E mutation among Iranian colorectal cancer patients.

Pathol Oncol Res. 2011-4-1

[5]
p53 mutation is common in microsatellite stable, BRAF mutant colorectal cancers.

Int J Cancer. 2011-8-3

[6]
Mutations in both KRAS and BRAF may contribute to the methylator phenotype in colon cancer.

Gastroenterology. 2008-6

[7]
BRAF, KRAS and PIK3CA mutations in colorectal serrated polyps and cancer: primary or secondary genetic events in colorectal carcinogenesis?

BMC Cancer. 2008-9-9

[8]
BRAF mutations are associated with distinctive clinical, pathological and molecular features of colorectal cancer independently of microsatellite instability status.

Mol Cancer. 2006-1-10

[9]
Advances in BRAF mutated colorectal cancer-could deoxycholic acid be the culprit?

Biochim Biophys Acta Rev Cancer. 2025-7

[10]
Specific mutations in KRAS codons 12 and 13, and patient prognosis in 1075 BRAF wild-type colorectal cancers.

Clin Cancer Res. 2012-7-2

本文引用的文献

[1]
The impact of DNA methylation on CTCF-mediated 3D genome organization.

Nat Struct Mol Biol. 2024-3

[2]
Intestinal polyphenol antioxidant activity involves redox signaling mechanisms facilitated by aquaporin activity.

Redox Biol. 2023-12

[3]
Vitamin C intake and colorectal cancer survival according to KRAS and BRAF mutation: a prospective study in two US cohorts.

Br J Cancer. 2023-11

[4]
NNMT enriches for AQP5 cancer stem cells to drive malignant progression in early gastric cardia adenocarcinoma.

Gut. 2023-12-7

[5]
The Application of Metabolomics in Recent Colorectal Cancer Studies: A State-of-the-Art Review.

Cancers (Basel). 2022-1-30

[6]
Deficient H2A.Z deposition is associated with genesis of uterine leiomyoma.

Nature. 2021-8

[7]
Genetic and Epigenetic Characteristics of Inflammatory Bowel Disease-Associated Colorectal Cancer.

Gastroenterology. 2021-8

[8]
No evidence of EMAST in whole genome sequencing data from 248 colorectal cancers.

Genes Chromosomes Cancer. 2021-7

[9]
Glis1 facilitates induction of pluripotency via an epigenome-metabolome-epigenome signalling cascade.

Nat Metab. 2020-9

[10]
Alterations of regulatory factors and DNA methylation pattern in thyroid cancer.

Cancer Biomark. 2020

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