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通过整合基因表达数据分析揭示精神分裂症的氧化应激相关分子特征和潜在治疗靶点

Revealing the Oxidative Stress-Related Molecular Characteristics and Potential Therapeutic Targets of Schizophrenia through Integrated Gene Expression Data Analysis.

作者信息

Zhu Xiu-Mei, Chen Ji, Ba Hua-Jie, Yang Chun, Liu Jian-Wei, Guo Rui, Li Shi-Lin, Huang Ping, Li Cheng-Tao, Zhang Su-Hua

机构信息

Institute of Forensic Science, Fudan University, Shanghai, 200032, China.

School of Forensic Medicine, China Medical University, Shenyang, Liaoning, 110122, China.

出版信息

Mol Neurobiol. 2025 Apr 11. doi: 10.1007/s12035-025-04924-3.

DOI:10.1007/s12035-025-04924-3
PMID:40214957
Abstract

Schizophrenia is a severe mental disorder characterized by oxidative stress imbalances. The underlying mechanisms of oxidative stress-related gene expression in schizophrenia require further investigation. Additionally, the diagnosis of schizophrenia lacks sensitive and specific biomarkers as well as predictive models for assessing susceptibility. We analyzed genome-wide mRNA expression profiles from GSE38484 (schizophrenia = 106, control = 96) and GSE54913 (schizophrenia = 18, control = 12) using Weighted Gene Co-expression Network Analysis and machine learning to identify oxidative stress-related hub genes in schizophrenia. Subsequent analyses included Gene Set Enrichment Analysis, protein-protein interaction networks, immune cell infiltration, and molecular docking. A diagnostic model was also constructed. We identified five hub genes associated with oxidative stress in schizophrenia: CTSB, RNH1, REC8, ITIH4, and TNFAIP8L1, and constructed a diagnostic model (AUC = 0.954). Five hub genes and twenty co-expressed genes were enriched in pathways related to endopeptidase and endoribonuclease activities. Significant differences in the abundance of seven immune cell types were noted in schizophrenia samples. Drug prediction and molecular docking suggested UREA and COUMARIN as potential therapeutic agents targeting CTSB. We identified five hub genes associated with oxidative stress in schizophrenia: CTSB, RNH1, REC8, ITIH4, and TNFAIP8L1. We carried out downstream analyses and constructed a diagnostic model for schizophrenia.

摘要

精神分裂症是一种以氧化应激失衡为特征的严重精神障碍。精神分裂症中氧化应激相关基因表达的潜在机制需要进一步研究。此外,精神分裂症的诊断缺乏敏感和特异的生物标志物以及用于评估易感性的预测模型。我们使用加权基因共表达网络分析和机器学习分析了来自GSE38484(精神分裂症=106,对照=96)和GSE54913(精神分裂症=18,对照=12)的全基因组mRNA表达谱,以鉴定精神分裂症中与氧化应激相关的枢纽基因。后续分析包括基因集富集分析、蛋白质-蛋白质相互作用网络、免疫细胞浸润和分子对接。还构建了一个诊断模型。我们鉴定出了精神分裂症中与氧化应激相关的五个枢纽基因:CTSB、RNH1、REC8、ITIH4和TNFAIP8L1,并构建了一个诊断模型(AUC=0.954)。五个枢纽基因和二十个共表达基因在与内肽酶和核糖核酸内切酶活性相关的通路中富集。在精神分裂症样本中,七种免疫细胞类型的丰度存在显著差异。药物预测和分子对接表明尿素和香豆素是靶向CTSB的潜在治疗药物。我们鉴定出了精神分裂症中与氧化应激相关的五个枢纽基因:CTSB、RNH1、REC8、ITIH4和TNFAIP8L1。我们进行了下游分析并构建了精神分裂症的诊断模型。

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本文引用的文献

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p62 Binding to Protein Kinase C Regulates HIV-1 gp120 V3 Loop Induced Microglial Inflammation.p62与蛋白激酶C的结合调节HIV-1 gp120 V3环诱导的小胶质细胞炎症。
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α-亚麻酸通过与 GPR120-β- arrestin2 结合抑制 NF-κB/NLRP3 通路减轻小鼠精神分裂症中小胶质细胞介导的神经炎症。
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