Zhang Wenjun, Luo Sheng, Jiang Mi, Chen Yongxin, Ren Rongna, Wu Yunhong, Wang Pengyu, Zhou Peng, Qin Jiong, Liao Weiping
Department of Neurology, Institute of Neuroscience, Key Laboratory of Neurogenetics and Channelopathies of Guangdong Province and the Ministry of Education of China, The Second Affiliated Hospital, Guangzhou Medical University, Guangzhou, Guangdong 510000, China.
School of Medical Laboratory, Shao Yang University, Shaoyang, Hunan 422000, China.
Genes Dis. 2024 Nov 29;12(4):101473. doi: 10.1016/j.gendis.2024.101473. eCollection 2025 Jul.
Genetic factors are the major causes of epilepsies, such as developmental and epileptic encephalopathy (DEE) and idiopathic generalized epilepsy (IGE). However, the etiology of most patients remains elusive. This study performed exon sequencing in a cohort of 173 patients with IGE. Additional cases were recruited from the matching platform in China. The excess and damaging effect of variants, the genotype-phenotype correlation, and the correlation between gene expression and phenotype were studied to validate the gene-disease association. compound heterozygous variants were identified in four unrelated cases with IGE. Additional variants were identified in five cases with DEE featured by generalized seizures from the matching platform, including two with and three with compound heterozygous variants. Two patients were refractory to antiseizure medications and all patients were on long-term therapy. The variants presented a significantly high excess of variants in the case-cohort. Besides origination, the DEE cases had each of the paired variants located closer to each other than the IGE cases or more significant alterations in hydrophobicity. The DEE-associated variants were all absent in the normal population and presented significantly lower minor allele frequency than the IGE-associated variants, suggesting a minor allele frequency-phenotype severity correlation. Gene expression analysis showed that was extensively expressed throughout the brain, particularly in the cortex. The temporal expression pattern correlated with the disease onset and outcomes. This study suggests that is associated with epilepsy and is a novel causative gene of DEE and generalized epilepsies.
遗传因素是癫痫的主要病因,如发育性和癫痫性脑病(DEE)以及特发性全身性癫痫(IGE)。然而,大多数患者的病因仍不明确。本研究对173例IGE患者进行了外显子测序。另外的病例是从中国的匹配平台招募的。研究了变异的过量和有害效应、基因型-表型相关性以及基因表达与表型之间的相关性,以验证基因-疾病关联。在4例不相关的IGE病例中鉴定出复合杂合变异。从匹配平台上另外在5例以全身性发作为特征的DEE病例中鉴定出变异,其中2例为杂合变异,3例为复合杂合变异。2例患者对抗癫痫药物难治,所有患者均接受长期治疗。这些变异在病例队列中呈现出显著过量。除了起源之外,DEE病例中每对变异彼此之间的距离比IGE病例更近,或者在疏水性方面有更显著的改变。与DEE相关的变异在正常人群中均不存在,并且其次要等位基因频率显著低于与IGE相关的变异,这表明次要等位基因频率与表型严重程度相关。基因表达分析表明,该基因在整个大脑中广泛表达,尤其是在皮质。该基因的时间表达模式与疾病发作和预后相关。本研究表明,该基因与癫痫相关,是DEE和全身性癫痫的一个新的致病基因。