Molecular Characterization and Impact of the Genetic Variants , LncRNA , and on the Risk of Coronary Artery Disease With and Without T2DM Comorbidity: A Genomic Biomarker Study.

BACKGROUND

Cardiovascular diseases, including coronary artery disease (CAD), represent one of the leading causes of death worldwide. Individuals with type 2 diabetes mellitus (T2DM) are susceptible to more severe forms of CAD. Given the strong genetic basis underlying the pathogenesis of T2DM and CAD, this study aimed to investigate the potential significance of the following genetic variants in the pathogenesis of CAD with and without T2DM comorbidity: hepatocyte nuclear factor-1 alpha () [p.I27L] rs1169288, glutathione S-transferase Pi 1 () rs1695 (A>G; Ile→Val), transcription factor 7-like 2 () rs7903146 (C>T), and long non-coding RNA H19 (LncRNA ) rs217727 (C>T).

METHODS

Three hundred subjects were enrolled in this study, containing 200 cases of CAD (100 non-diabetic and 100 diabetic) and 100 healthy individuals as controls. The genotyping studies were conducted using amplification-refractory mutation system polymerase chain reaction (ARMS-PCR).

RESULTS

Demographic and clinical characteristics associated with the two CAD groups demonstrated significant differences. Additionally, a significant difference in genotype frequencies of the (rs1695 A>G) gene polymorphism was detected between CAD patients and healthy controls, with the GG genotype being more common in CAD patients (18% in non-diabetic and 20% in diabetic) than in the healthy controls (3%) ( < 0.0001 and = 0.00003). Those with the GG genotype had a notably higher risk of developing CAD, regardless of T2DM comorbidity. The LncRNA (rs217727 C>T) gene polymorphism displayed significant differences in genotype frequencies between healthy controls and non-diabetic CAD patients, but not in diabetic CAD patients. The TT genotype was much more common in non-diabetic CAD patients (20%) compared to healthy controls (6%, = 0.0006), with nondiabetic patients also having a higher frequency of the T allele (0.42 vs. 0.23 in controls). Similarly, the (rs7903146 C>T) gene polymorphism displayed significant differences in genotype frequencies between healthy controls and non-diabetic CAD patients, instead of diabetic CAD patients. The CT heterozygous genotype was more common in non-diabetic CAD patients (63%) than in healthy controls (35%, = 0.0001). The (rs1169288 G>T) gene polymorphism showed significant differences in genotype frequencies between healthy controls and diabetic CAD patients, but not between non-diabetic CAD patients. The TT genotype was notably overrepresented in diabetic CAD patients (8%) than in healthy controls (1%, = 0.04), and diabetic patients also had a higher frequency of the T allele (0.38 vs. 0.33 in controls).

CONCLUSION

The data from the current study have identified certain genetic variants of interest in the given population as risk markers of CAD with and without T2DM comorbidity.