Calderón-Zavala Ariana C, Mendez Aaron S, Heldwein Ekaterina E
Department of Molecular Biology and Microbiology, Tufts University School of Medicine, Boston, MA, USA.
Graduate Program in Molecular Microbiology, Graduate School of Biomedical Sciences, Tufts University School of Medicine, Boston, MA, USA.
Bio Protoc. 2025 Jun 5;15(11):e5334. doi: 10.21769/BioProtoc.5334.
Since the establishment of the iSLK-BAC16 cell culture system, iSLK-BAC16 cells and their derivatives have been widely used for Kaposi's sarcoma-associated herpesvirus (KSHV) studies. However, iSLK-BAC16 cells can be difficult to work with, in part due to the lack of standardized protocols and conflicting troubleshooting suggestions. Here, we describe the protocol for general iSLK-BAC16 cell culture and reactivation, which induces lytic KSHV replication and virion production. This protocol achieves robust levels of KSHV reactivation in our hands and can be readily used for studies of KSHV lytic infection mechanisms. Key features • This protocol describes methods for culturing and antibiotically selecting iSLK-BAC16 cells for robust KSHV reactivation. • Use of flow cytometry to quantify KSHV reactivation rates. • Innovative use of automated plate readers to assess KSHV reactivation. Graphical overview A typical timeline of iSLK-BAC16 cell culture, antibiotic selection, KSHV reactivation, flow cytometry quantification, and plate reader assessment of KSHV lytic replication. Corresponding media requirements are denoted under the respective procedures. iSLK-BAC16 = doxycycline-inducible endothelial cells harboring the KSHV genome on an artificial bacterial chromosome; Dox = doxycycline; NaBu = sodium butyrate.
自从建立iSLK-BAC16细胞培养系统以来,iSLK-BAC16细胞及其衍生物已被广泛用于卡波西肉瘤相关疱疹病毒(KSHV)的研究。然而,iSLK-BAC16细胞可能难以操作,部分原因是缺乏标准化方案以及相互矛盾的故障排除建议。在此,我们描述了一般iSLK-BAC16细胞培养和再激活的方案,该方案可诱导KSHV的裂解性复制和病毒粒子产生。此方案在我们手中可实现强大的KSHV再激活水平,并且可轻松用于KSHV裂解性感染机制的研究。关键特性 • 本方案描述了培养和通过抗生素筛选iSLK-BAC16细胞以实现强大的KSHV再激活的方法。 • 使用流式细胞术量化KSHV再激活率。 • 创新性地使用自动酶标仪评估KSHV再激活。图形概述 iSLK-BAC16细胞培养、抗生素筛选、KSHV再激活、流式细胞术量化以及酶标仪评估KSHV裂解性复制的典型时间线。相应的培养基要求在各自步骤下注明。iSLK-BAC16 = 在人工细菌染色体上携带KSHV基因组的强力霉素诱导型内皮细胞;Dox = 强力霉素;NaBu = 丁酸钠。