Ren Xing, Yao Xiang-Rong, Chen Kun, Xiao Wen-Tao, He Jun-Yan
Clinical Laboratory Medicine Center, The First Affiliated Hospital, Hengyang Medical School, University of South China, Hengyang, China.
Department of Oncology, The First Affiliated Hospital, Hengyang Medical School, University of South China, Hengyang, China.
Sci Rep. 2025 Jul 1;15(1):21077. doi: 10.1038/s41598-025-07815-8.
Glioblastoma (GBM) is the most aggressive primary brain malignancy, characterized by a poor prognosis and limited therapeutic options. Identifying essential genes and pathways involved in GBM proliferation is important for developing prognostic biomarkers and potential therapeutic targets. In this study, genome-wide CRISPR-Cas9 screening data from the dependency map (DepMap) database were analyzed to explore proliferation-related essential genes and pathways in GBM. A five-gene prognostic signature-CLSPN, HSP90B1, MED10, SAMM50, and TOMM20-was constructed using univariate, LASSO, and multivariate Cox regression analyses, and its prognostic value was evaluated in independent cohorts. Weighted gene co-expression network analysis (WGCNA) and gene set enrichment analysis (GSEA) suggested that the E2F targets pathway may be involved in GBM proliferation, consistent with the CRISPR screening results. Among the identified genes, MED10 was preliminarily implicated in regulating GBM cell proliferation and migration, as supported by functional assays. These findings propose a proliferation-related gene signature with potential prognostic relevance in GBM and indicate the E2F targets pathway as a biological process potentially associated with tumor progression. MED10 warrants further investigation as a candidate gene in the context of GBM biology and therapy.
胶质母细胞瘤(GBM)是最具侵袭性的原发性脑恶性肿瘤,其特征是预后不良且治疗选择有限。确定参与GBM增殖的关键基因和信号通路对于开发预后生物标志物和潜在治疗靶点至关重要。在本研究中,分析了来自依赖性图谱(DepMap)数据库的全基因组CRISPR-Cas9筛选数据,以探索GBM中与增殖相关的关键基因和信号通路。使用单变量、LASSO和多变量Cox回归分析构建了一个五基因预后特征——CLSPN、HSP90B1、MED10、SAMM50和TOMM20,并在独立队列中评估了其预后价值。加权基因共表达网络分析(WGCNA)和基因集富集分析(GSEA)表明,E2F靶标信号通路可能参与GBM增殖,这与CRISPR筛选结果一致。在鉴定出的基因中,功能实验支持MED10初步参与调节GBM细胞增殖和迁移。这些发现提出了一个在GBM中具有潜在预后相关性的增殖相关基因特征,并表明E2F靶标信号通路是一个可能与肿瘤进展相关的生物学过程。MED10作为GBM生物学和治疗背景下的候选基因值得进一步研究。