Liu Tianyi, Zhang Meng, Farsh Tatyanah, Li Haolong, Kishishita Audrey, Barpanda Abhilash, Leung Stanley G, Zhu Jun, Jung Hyuncheol, Hua Junjie Tony, Zhu Xiaolin, Kim Alexander B, Goo Young Ah, Son Minsoo, Kim Jaenyeon, Subramanian Aish, Sjöström Martin, Fuh Katherine C, Chapman Jocelyn S, Carnevale Julia, Gilbert Luke A, Lakkaraju Aparna, Bruno Peter M, Quigley David, Wiita Arun P, Feng Felix Y, DeSelm Carl J
University of California, San Francisco, Helen Diller Family Comprehensive Cancer Center, San Francisco, CA, 94158, USA.
Department of Radiation Oncology, University of California, San Francisco, San Francisco, CA, 94158, USA.
Nat Commun. 2025 Jul 1;16(1):5616. doi: 10.1038/s41467-025-60745-x.
Macrophages infiltrate solid tumors and either support survival or induce cancer cell death through phagocytosis or cytotoxicity. To uncover regulators of macrophage cytotoxicity towards cancer cells, we perform two co-culture CRISPR screens using CAR-macrophages targeting different tumor associated antigens. Both identify ATG9A as an important regulator of this cytotoxic activity. In vitro and in vivo, ATG9A depletion in cancer cells sensitizes them to macrophage-mediated killing. Proteomic and lipidomic analyses reveal that ATG9A deficiency impairs the cancer cell response to macrophage-induced plasma membrane damage through defective lysosomal exocytosis, reduced ceramide production, and disrupted caveolar endocytosis. Depleting non-cytotoxic macrophages using CSF1R inhibition while preventing ATG9A-mediated tumor membrane repair enhances the anti-tumor activity of therapeutic antibodies in mice. Thus, macrophage cytotoxicity plays an important role in tumor elimination during antibody or CAR-macrophage treatment, and inhibiting tumor membrane repair via ATG9A, particularly in combination with cytotoxic macrophage enrichment through CSF1R inhibition, improves tumor-targeting macrophage efficacy.
巨噬细胞浸润实体瘤,通过吞噬作用或细胞毒性作用来支持癌细胞存活或诱导癌细胞死亡。为了揭示巨噬细胞对癌细胞细胞毒性的调节因子,我们使用靶向不同肿瘤相关抗原的嵌合抗原受体(CAR)巨噬细胞进行了两项共培养CRISPR筛选。两项筛选均确定自噬相关蛋白9A(ATG9A)是这种细胞毒性活性的重要调节因子。在体外和体内,癌细胞中ATG9A的缺失使它们对巨噬细胞介导的杀伤敏感。蛋白质组学和脂质组学分析表明,ATG9A缺陷通过溶酶体胞吐缺陷、神经酰胺生成减少和小窝内吞作用破坏,损害了癌细胞对巨噬细胞诱导的质膜损伤的反应。使用集落刺激因子1受体(CSF1R)抑制剂耗尽非细胞毒性巨噬细胞,同时防止ATG9A介导的肿瘤膜修复,可增强治疗性抗体在小鼠体内的抗肿瘤活性。因此,巨噬细胞细胞毒性在抗体或CAR巨噬细胞治疗期间的肿瘤清除中起重要作用,通过ATG9A抑制肿瘤膜修复,特别是与通过CSF1R抑制富集细胞毒性巨噬细胞相结合,可提高靶向肿瘤的巨噬细胞疗效。
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