Potiyanadech Wutthipat, Sriphuttha Cheeranan, Seabkongseng Tuangrak, Teaumroong Neung, Tittabutr Panlada, Boonchuen Pakpoom
Institute of Research and Development, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand.
School of Biotechnology, Institute of Agricultural Technology, Suranaree University of Technology, Nakhon Ratchasima 30000, Thailand.
Int J Mol Sci. 2025 Jun 21;26(13):5981. doi: 10.3390/ijms26135981.
Serine/arginine splicing factors (SRSFs) are critical regulators of gene expression that influence alternative splicing through RNA binding via the RNA recognition motif (RRM). Circular RNAs (circRNAs) are a subset of non-coding RNAs that exhibit differential expression in WSSV-infected . This study investigates the role of LvSRSF2 in regulating circRNA expression in response to WSSV infection. LvSRSF2 was highly expressed in hemocytes and upregulated during WSSV infection. Silencing LvSRSF2 using dsRNA significantly upregulated the expression of circRNAs (circ-Alpha2, circ-Anillin, circ-Hemocytin, circ-Nephrin, and circ-Toll) in both WSSV-infected and uninfected shrimps at 72 h post-injection with dsRNAs. Knockdown of LvSRSF2 also significantly reduced WSSV copy numbers at 24 h post-infection and extended shrimp survival, with knockdown shrimp surviving up to 9 d compared to the control group. In addition, circ-Hemocytin, an SRSF2-related circRNA, was predicted to interact with six miRNAs targeting immune-related genes such as Toll, STAT, NF-κB, and Vago4. Following WSSV infection, circ-Hemocytin expression increased at 24 and 48 hpi, and the immune genes STAT and Vago4 were also upregulated, suggesting a potential circRNA-miRNA-mRNA regulatory axis in shrimp antiviral defense. Furthermore, targeted suppression of circ-Hemocytin expression using siRNAs significantly reduced its expression without affecting the corresponding linear transcript and resulted in a notable decrease in WSSV load in shrimp gills, highlighting its potential role in antiviral defense.
丝氨酸/精氨酸剪接因子(SRSFs)是基因表达的关键调节因子,通过RNA识别基序(RRM)与RNA结合来影响可变剪接。环状RNA(circRNAs)是非编码RNA的一个子集,在感染对虾白斑综合征病毒(WSSV)的对虾中表现出差异表达。本研究调查了对虾LvSRSF2在响应WSSV感染时调节circRNA表达中的作用。LvSRSF2在血细胞中高表达,且在WSSV感染期间上调。在注射双链RNA(dsRNA)72小时后,使用dsRNA沉默LvSRSF2显著上调了WSSV感染和未感染对虾中circRNA(circ-Alpha2、circ-Anillin、circ-Hemocytin、circ-Nephrin和circ-Toll)的表达。敲低LvSRSF2还显著降低了感染后24小时的WSSV拷贝数,并延长了对虾的存活时间,与对照组相比,敲低组对虾存活长达9天。此外,可以预测,一种与SRSF2相关的circRNA即circ-Hemocytin会与六种靶向免疫相关基因(如Toll、STAT、NF-κB和Vago4)的微小RNA(miRNA)相互作用。WSSV感染后,circ-Hemocytin在感染后24小时和48小时表达增加,免疫基因STAT和Vago4也上调,这表明在对虾抗病毒防御中存在潜在的circRNA-miRNA-mRNA调控轴。此外,使用小干扰RNA(siRNA)靶向抑制circ-Hemocytin的表达显著降低了其表达,而不影响相应的线性转录本,并导致对虾鳃中WSSV载量显著下降,突出了其在抗病毒防御中的潜在作用。