Suppr超能文献

细胞影响建模描绘了原发性和转移性胰腺导管腺癌中功能相关的细胞邻域。

Modeling cellular influence delineates functionally relevant cellular neighborhoods in primary and metastatic pancreatic ductal adenocarcinoma.

作者信息

Cho Yeonju, Lee Jae W, Shin Sarah M, Hernandez Alexei G, Yuan Xuan, Schneider Jowaly, Hooper Jody E, Wood Laura D, Jaffee Elizabeth M, Deshpande Atul, Ho Won Jin

机构信息

Department of Oncology, Sidney Kimmel Comprehensive Cancer Center, Johns Hopkins University. Baltimore, MD USA.

Convergence Institute, Johns Hopkins University. Baltimore, MD USA.

出版信息

bioRxiv. 2025 Jun 17:2025.06.12.659314. doi: 10.1101/2025.06.12.659314.

Abstract

Pancreatic ductal adenocarcinoma (PDAC) is a highly lethal cancer, with liver metastases significantly worsening outcomes. However, distinct features of the tumor microenvironment (TME) between primary and metastatic sites remain poorly defined. Cellular neighborhoods within the TME are recognized as functional units that influence tumor behavior. Conventional spatial methods, which assign equal weights to all cells in a region, fail to capture the nuances of cellular interactions. To address this, we developed Functional Cellular Neighborhood (FunCN) quantification, which integrates both the proportion and proximity of surrounding cells. Applying FunCN to PDAC imaging mass cytometry data, we identified neutrophil-enriched interactions in liver metastases compared to primary tumors, correlating with elevated VISTA expression by tumor cells. Additionally, FunCN clusters around CD8⁺ T cells in pancreas and liver were associated with higher TIGIT and LAG3, respectively. These findings demonstrate the importance of spatial immune landscapes in PDAC and identify potential therapeutic opportunities.

摘要

胰腺导管腺癌(PDAC)是一种极具致死性的癌症,肝转移会显著恶化预后。然而,原发部位和转移部位肿瘤微环境(TME)的不同特征仍不清楚。TME内的细胞邻域被认为是影响肿瘤行为的功能单元。传统的空间方法对区域内所有细胞赋予同等权重,无法捕捉细胞间相互作用的细微差别。为解决这一问题,我们开发了功能细胞邻域(FunCN)量化方法,该方法整合了周围细胞的比例和邻近性。将FunCN应用于PDAC成像质谱流式细胞术数据,我们发现与原发性肿瘤相比,肝转移灶中存在富含中性粒细胞的相互作用,这与肿瘤细胞中VISTA表达升高相关。此外,胰腺和肝脏中围绕CD8⁺T细胞的FunCN簇分别与较高的TIGIT和LAG3相关。这些发现证明了PDAC中空间免疫格局的重要性,并确定了潜在的治疗机会。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8ff/12262348/b3c9d8aa2376/nihpp-2025.06.12.659314v1-f0001.jpg

相似文献

4
M1 Macrophage-Derived TNF-α Promotes Pancreatic Cancer Ferroptosis Via p38 MAPK-ACSL4 Pathway.
Curr Mol Med. 2025 Jul 10. doi: 10.2174/0115665240374551250630075409.
5
The extra-islet pancreas supports autoimmunity in human type 1 diabetes.
Elife. 2025 Apr 15;13:RP100535. doi: 10.7554/eLife.100535.
6
Systemic treatments for metastatic cutaneous melanoma.
Cochrane Database Syst Rev. 2018 Feb 6;2(2):CD011123. doi: 10.1002/14651858.CD011123.pub2.
7
PLAGL2 as a prognostic biomarker and an EMT-promoting factor in PDAC.
Sci Rep. 2025 Jul 14;15(1):25425. doi: 10.1038/s41598-025-09591-x.

本文引用的文献

1
Conserved spatial subtypes and cellular neighborhoods of cancer-associated fibroblasts revealed by single-cell spatial multi-omics.
Cancer Cell. 2025 May 12;43(5):905-924.e6. doi: 10.1016/j.ccell.2025.03.004. Epub 2025 Mar 27.
3
Spatial modelling of the tumor microenvironment from multiplex immunofluorescence images: methods and applications.
Front Immunol. 2023 Dec 20;14:1288802. doi: 10.3389/fimmu.2023.1288802. eCollection 2023.
4
Spatial proximity of tumor-immune interactions predicts patient outcome in hepatocellular carcinoma.
Hepatology. 2024 Apr 1;79(4):768-779. doi: 10.1097/HEP.0000000000000600. Epub 2023 Sep 19.
7
Is Associated with Immune Infiltration and Immunotherapy Signatures in AML and Promotes Its Progression.
J Oncol. 2023 Apr 7;2023:9988405. doi: 10.1155/2023/9988405. eCollection 2023.
8
VISTA expression and patient selection for immune-based anticancer therapy.
Front Immunol. 2023 Feb 20;14:1086102. doi: 10.3389/fimmu.2023.1086102. eCollection 2023.
9
Cancer statistics, 2023.
CA Cancer J Clin. 2023 Jan;73(1):17-48. doi: 10.3322/caac.21763.
10
Spatial architecture of the immune microenvironment orchestrates tumor immunity and therapeutic response.
J Hematol Oncol. 2021 Jun 25;14(1):98. doi: 10.1186/s13045-021-01103-4.

文献AI研究员

20分钟写一篇综述,助力文献阅读效率提升50倍。

立即体验

用中文搜PubMed

大模型驱动的PubMed中文搜索引擎

马上搜索

文档翻译

学术文献翻译模型,支持多种主流文档格式。

立即体验