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蛋白质中CHF基团之间的残基间空间标量F-F耦合。

Inter-residue through-space scalar F-F couplings between CHF groups in a protein.

作者信息

Tan Yi Jiun, Abdelkader Elwy H, Herath Iresha D, Maleckis Ansis, Otting Gottfried

机构信息

ARC Centre of Excellence for Innovations in Peptide and Protein Science, Research School of Chemistry, Australian National University, Canberra, ACT 2601, Australia.

Latvian Institute of Organic Synthesis, Aizkraukles 21, 1006 Riga, Latvia.

出版信息

Magn Reson (Gott). 2025 Jul 14;6(2):131-142. doi: 10.5194/mr-6-131-2025. eCollection 2025.

Abstract

Using cell-free protein synthesis, the protein G B1 domain (GB1) was prepared with uniform high-level substitution of leucine by (2 ,4 )-5-fluoroleucine (FLeu1), (2 ,4 )-5-fluoroleucine (FLeu2), or 5,5-difluoroleucine (diFLeu). nuclear magnetic resonance (NMR) spectra showed chemical shift ranges spanning more than 9 . Through-space scalar couplings between groups arising from transient fluorine-fluorine contacts are readily manifested in [ , ]-TOCSY spectra. The chemical shifts correlate with the three-bond - couplings ( ), confirming the -gauche effect as the predominant determinant of the chemical shifts of the groups. Different couplings of different groups indicate that the rotation of the groups can be sufficiently restricted in different protein environments to result in the preferential population of a single rotamer. The couplings also show that groups populate the different rotameric states differently in the 5,5-difluoroleucine residues than in the monofluoroleucine analogues, showing that two groups in close proximity influence each other's conformation. Nonetheless, the resonances of the and groups of difluoroleucine residues can be assigned stereospecifically with good confidence by comparison with the chemical shifts of the enantiomerically pure fluoroleucines. nuclear Overhauser effects (NOEs) observed with water indicate hydration with sub-nanosecond residence times.

摘要

利用无细胞蛋白质合成技术,制备了蛋白质G B1结构域(GB1),其中亮氨酸被(2 ,4 )-5-氟亮氨酸(FLeu1)、(2 ,4 )-5-氟亮氨酸(FLeu2)或5,5-二氟亮氨酸(diFLeu)均匀高水平取代。核磁共振(NMR)光谱显示化学位移范围跨越超过9 。由瞬态氟-氟接触产生的基团之间的空间标量耦合在[ , ]-TOCSY光谱中很容易表现出来。化学位移与三键 - 耦合( )相关,证实了 -gauche效应是基团化学位移的主要决定因素。不同基团的不同耦合表明,在不同的蛋白质环境中,基团的旋转可以受到足够的限制,从而导致单一旋转异构体的优先分布。耦合还表明,5,5-二氟亮氨酸残基中的基团与单氟亮氨酸类似物中的基团在不同旋转异构体状态中的分布不同,表明两个相邻的基团相互影响彼此构象。尽管如此,通过与对映体纯氟亮氨酸的化学位移进行比较,可以很有把握地立体特异性地归属二氟亮氨酸残基的 和 基团的共振。用水观察到的核Overhauser效应(NOEs)表明水合作用的停留时间为亚纳秒级。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1593/12281167/725ce84f02ac/mr-6-131-2025-f01.jpg

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