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急性胰腺炎和肌肉减少症中生物标志物及免疫代谢调节因子的鉴定:一项多模态转录组学研究

Identification of Biomarkers and Immune-Metabolic Regulators in Acute Pancreatitis and Sarcopenia: A Multi-Modal Transcriptomics Study.

作者信息

Zhang Shihang, Hu Cheng, Wang Xinwei, Huang Zixing, Xia Qing, Deng Lihui

机构信息

West China Centre of Excellence for Pancreatitis, Institute of Integrated Traditional Chinese and Western Medicine, West China Hospital, Sichuan University, Chengdu, China.

Department of Radiology, West China Hospital, Sichuan University, Chengdu, China.

出版信息

J Cell Mol Med. 2025 Aug;29(15):e70769. doi: 10.1111/jcmm.70769.

Abstract

Studies suggest a clinically significant association between acute pancreatitis and sarcopenia. However, the molecular mechanisms behind this association have not been fully elucidated. Here, we systematically investigated gene expression profiles by differentially expressed gene (DEG) analysis, weighted gene co-expression network analysis (WGCNA) and functional enrichment analysis, and identified a total of 36 genes as shared genes between acute pancreatitis and sarcopenia. Functional enrichment analysis revealed that these genes were enriched in immune-inflammatory processes and pathways. Furthermore, we evaluated relevant hub genes in a random forest model and investigated their expression, diagnostic performance and immune cell relationships. Random forest modelling prioritised chloride intracellular channel 5 (CLIC5), solute carrier family 38 member 1 (SLC38A1) and complement C1q B chain (C1QB) as key candidate biomarkers. Immune infiltration analysis linked these genes to dysregulated T cells, monocytes and mast cells in both diseases. Finally, we constructed a regulatory network involving miRNAs, mRNAs and transcription factors to illustrate further the regulations of three genes' transcription in acute pancreatitis and sarcopenia. The diagnostic value of CLIC5, SLC38A1 and C1QB was performed by receiver operating characteristic curves and the area under the curve in the datasets, and the validation results confirmed a consistent trend of downregulation of CLIC5 and SLC38A1 in AP and sarcopenia. This study revealed for the first time that CLIC5 and SLC38A1 were shared biomarkers for AP and sarcopenia. Their association with immune-metabolic dysregulation highlights their potential as therapeutic targets.

摘要

研究表明急性胰腺炎与肌肉减少症之间存在具有临床意义的关联。然而,这种关联背后的分子机制尚未完全阐明。在此,我们通过差异表达基因(DEG)分析、加权基因共表达网络分析(WGCNA)和功能富集分析系统地研究了基因表达谱,并确定了总共36个基因作为急性胰腺炎和肌肉减少症之间的共享基因。功能富集分析表明这些基因富集于免疫炎症过程和通路。此外,我们在随机森林模型中评估了相关的枢纽基因,并研究了它们的表达、诊断性能和免疫细胞关系。随机森林建模将氯离子细胞内通道5(CLIC5)、溶质载体家族38成员1(SLC38A1)和补体C1q B链(C1QB)列为关键候选生物标志物。免疫浸润分析将这些基因与两种疾病中失调的T细胞、单核细胞和肥大细胞联系起来。最后,我们构建了一个涉及miRNA、mRNA和转录因子的调控网络,以进一步说明这三个基因在急性胰腺炎和肌肉减少症中的转录调控。通过受试者工作特征曲线和数据集中曲线下面积对CLIC5、SLC38A1和C1QB的诊断价值进行了评估,验证结果证实了CLIC5和SLC38A1在急性胰腺炎和肌肉减少症中下调的一致趋势。本研究首次揭示CLIC5和SLC38A1是急性胰腺炎和肌肉减少症的共享生物标志物。它们与免疫代谢失调的关联突出了它们作为治疗靶点的潜力。

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