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双向液-液相分离特征的多组学分析揭示肾细胞癌的免疫治疗反应和预后

Multi-omics analysis of bidirectional liquid-liquid phase separation signatures reveals immunotherapy response and prognosis in renal cell carcinoma.

作者信息

Wang Zheyu, Li Hongze, Hou Xiaolong, Zhang Senyu, Deng Kai, Wang Nianqiang, Wang Wei, Zhu Yuyan

机构信息

Department of Urology, The First Hospital of China Medical University, Shenyang, 110001, China.

Department of Gynaecology, The First Hospital of China Medical University, Shenyang, 110001, China.

出版信息

BMC Cancer. 2025 Aug 13;25(1):1314. doi: 10.1186/s12885-025-14749-x.

DOI:10.1186/s12885-025-14749-x
PMID:40804718
Abstract

Renal cell carcinoma (RCC) is a common malignant tumor of the urinary system, accounting for approximately 80% of urinary tract malignancies, with clear cell renal cell carcinoma (ccRCC) being the most prevalent subtype. Despite its high incidence, the pathogenesis of ccRCC remains incompletely elucidated, and limitations persist in early diagnosis, targeted therapy, and immunotherapy. Based on emerging evidence highlighting the critical role of liquid-liquid phase separation (LLPS) in tumor proliferation and invasion, this study leveraged multiple ccRCC cohorts to employ Mendelian randomization (MR) and ultimately developed a novel Bidirectional Liquid-Liquid Phase Separation-associated Index (B-LLPSI) using LASSO regression, aiming to predict patient prognosis and therapeutic response. Notably, B-LLPSI demonstrates substantial potential as a universal prognostic indicator across multiple cancer types, underpinning its prospective application in individualized oncology. Paradoxically, while high B-LLPSI levels correlate with poorer patient prognosis, they simultaneously predict enhanced responsiveness to immunotherapy. Furthermore, the B-LLPSI signature was found to be upregulated in tumor tissues and capable of promoting tumor proliferation and invasion. In summary, B-LLPSI holds promise as a robust and independent prognostic tool for diverse cancers, providing critical insights for formulating individualized treatment strategies.

摘要

肾细胞癌(RCC)是泌尿系统常见的恶性肿瘤,约占尿路恶性肿瘤的80%,其中透明细胞肾细胞癌(ccRCC)是最常见的亚型。尽管其发病率高,但ccRCC的发病机制仍未完全阐明,在早期诊断、靶向治疗和免疫治疗方面仍存在局限性。基于新出现的证据突出了液-液相分离(LLPS)在肿瘤增殖和侵袭中的关键作用,本研究利用多个ccRCC队列采用孟德尔随机化(MR),最终使用LASSO回归开发了一种新型的双向液-液相分离相关指数(B-LLPSI),旨在预测患者的预后和治疗反应。值得注意的是,B-LLPSI作为多种癌症类型的通用预后指标具有巨大潜力,为其在个体化肿瘤学中的前瞻性应用奠定了基础。矛盾的是,虽然高B-LLPSI水平与患者预后较差相关,但它们同时预测对免疫治疗的反应增强。此外,发现B-LLPSI特征在肿瘤组织中上调,并且能够促进肿瘤增殖和侵袭。总之,B-LLPSI有望成为多种癌症强大而独立的预后工具,为制定个体化治疗策略提供关键见解。

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本文引用的文献

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Liquid-liquid phase separation in subcellular assemblages and signaling pathways: Chromatin modifications induced gene regulation for cellular physiology and functions including carcinogenesis.亚细胞聚集体和信号通路中的液-液相分离:染色质修饰诱导基因调控细胞生理和功能,包括癌变。
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Adjuvant Immunotherapy for Kidney Cancer - A New Strategy with New Challenges.肾癌的辅助免疫治疗——一项面临新挑战的新策略。
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Global research hotspots, development trends and prospect discoveries of phase separation in cancer: a decade-long informatics investigation.
癌症中相分离的全球研究热点、发展趋势及前景发现:一项长达十年的信息学调查
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Tumor mutational burden for the prediction of PD-(L)1 blockade efficacy in cancer: challenges and opportunities.肿瘤突变负担预测癌症 PD-(L)1 阻断疗效:挑战与机遇。
Ann Oncol. 2024 Jun;35(6):508-522. doi: 10.1016/j.annonc.2024.03.007. Epub 2024 Mar 26.
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The Burgeoning Significance of Liquid-Liquid Phase Separation in the Pathogenesis and Therapeutics of Cancers.液液相分离在癌症发病机制和治疗中的重要性日益凸显。
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Identification of PANoptosis-related signature reveals immune infiltration characteristics and immunotherapy responses for renal cell carcinoma.鉴定 PANoptosis 相关特征可揭示肾细胞癌的免疫浸润特征和免疫治疗反应。
BMC Cancer. 2024 Mar 4;24(1):292. doi: 10.1186/s12885-024-12067-2.
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Global epidemiology of kidney cancer.肾癌的全球流行病学
Nephrol Dial Transplant. 2024 May 31;39(6):920-928. doi: 10.1093/ndt/gfae036.
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Impact of sunitinib resistance on clear cell renal cell carcinoma therapeutic sensitivity .舒尼替尼耐药对透明细胞肾细胞癌治疗敏感性的影响。
Cell Cycle. 2024 Jan;23(1):43-55. doi: 10.1080/15384101.2024.2306760. Epub 2024 Jan 23.
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Cancer statistics, 2024.2024年癌症统计数据。
CA Cancer J Clin. 2024 Jan-Feb;74(1):12-49. doi: 10.3322/caac.21820. Epub 2024 Jan 17.
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Emerging Immunotherapy Approaches for Advanced Clear Cell Renal Cell Carcinoma.新兴免疫疗法在晚期透明细胞肾细胞癌中的应用。
Cells. 2023 Dec 22;13(1):34. doi: 10.3390/cells13010034.