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Discovery of bromobenzyl phenyl ether derivative YPD-29B: a novel pre-clinical compound targeting the programmed cell death-1/programmed cell death-ligand 1 (PD-1/PD-L1) interaction.

作者信息

Yang Yang, Xu Meiqin, Wang Ke, Xia Liang, Ning Qianchen, Wu Xintong, Zang Xinyue, Lai Fangfang, Chen Xiaoguang, Feng Zhiqiang

机构信息

Institute of Materia Medica, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, China; College of Medicine, Linyi University, Linyi 276000, China.

Institute of Materia Medica, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, China; Beijing Key Laboratory of Active Substance Discovery and Druggability Evaluation, Institute of Materia Medica, Chinese Academy of Medical Sciences & Peking Union Medical College, Beijing 100050, China.

出版信息

Bioorg Med Chem. 2025 Dec 1;130:118366. doi: 10.1016/j.bmc.2025.118366. Epub 2025 Aug 19.

Abstract

Targeting the PD-1/PD-L1 immune checkpoint pathway with small molecules has exhibited great promise. Herein, to develop the inhibitors with good activity, pharmacokinetic properties and druggability, a novel series of halogens substituted derivatives at the 2-position of the biphenyl group were synthesized, screened, and their inhibitory activity against the PD-1/PD-L1 protein-protein interaction (PPI) was evaluated through a HTRF assay. Among them, YPD-29B exhibited potent activity with IC value of less than 1 pM. Furthermore, the PBMC-based PD-1/PD-L1 blockade bioassay revealed that YPD-29B could inhibit the PD-1/PD-L1 interaction and restore T-cell function with the concentration of 10 nM at the cellular level and with the IC value of 0.18 nM. However, the poor solubility of YPD-29B limited the evaluation of antitumor activity in vivo. Thus, the prodrug, sodium salt and hydrochloride of YPD-29B were designed and synthesized to conduct the animal experiments, revealing the obvious anti-melanoma activity of YPD-29B-Na with TGI of 64.11 % and weak toxicity on the blood index and the body weight compared with the positive control CTX. T lymphocyte infiltration markedly increased in tumors of the different treated groups, suggesting the activation of the immune system. Besides, molecular docking verified the rationality of the design. IMMH-010, as a prodrug of YPD-29B has been approved for clinical phase I by NMPA. We hope these above results could offer a novel perspective for the development of PD-1/PD-L1 small molecule inhibitors.

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