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噬菌体在发酵蔬菜中的生态存在及功能作用

Ecological presence and functional role of bacteriophages in fermented vegetables.

作者信息

Lin Xia, Deng Chunhui, Shu Yue, Li Shengshuai, Song Yunlong, Kong Hong, Liang Ziwei, Liu Lei, Rao Yu

机构信息

Food Microbiology Key Laboratory of Sichuan Province, School of Food Science and Bioengineering, Xihua University, Chengdu, 610039, China.

State Key Laboratory for Animal Disease Control and Prevention, College of Veterinary Medicine, Lanzhou University, Lanzhou Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Lanzhou, 730000, China.

出版信息

Food Microbiol. 2026 Jan;133:104884. doi: 10.1016/j.fm.2025.104884. Epub 2025 Jul 30.

Abstract

Fermented vegetables are widely favored by consumers for their distinctive flavors and nutritional value, with their quality attributes being closely associated with microbiome dynamics. Recent advances in high-throughput sequencing technologies have revealed abundant bacteriophage resources within the fermented vegetable microbiome. These viral components significantly influence fermentation processes and product characteristics by modulating microbial community structure and function. However, research on optimizing vegetable fermentation processes through bacteriophage-mediated regulation remains in its nascent stage. This study systematically summarizes the compositional characteristics and dynamic patterns of microbial communities in fermented vegetables. We review the latest research progress on bacteriophage diversity and functional properties in fermented vegetables. Furthermore, by integrating multi-omics data, we provide insights into the complex interaction network among bacteriophages, host microbiota, and metabolic products. The results demonstrate that bacteriophages precisely regulate the fermentation process by mediating microbial community succession via lytic-lysogenic cycles and participating in the biosynthesis of key flavor compounds through encoded auxiliary metabolic genes. Finally, we sort out an integrated technical framework combining metagenomics and culturomics. This research provides novel insights into understanding the functional mechanisms of bacteriophages in fermented vegetables, offers a theoretical foundation for developing precision fermentation technologies based on bacteriophage regulation.

摘要

发酵蔬菜因其独特的风味和营养价值而受到消费者的广泛青睐,其品质特性与微生物群落动态密切相关。高通量测序技术的最新进展揭示了发酵蔬菜微生物群落中丰富的噬菌体资源。这些病毒成分通过调节微生物群落结构和功能,显著影响发酵过程和产品特性。然而,通过噬菌体介导的调控来优化蔬菜发酵过程的研究仍处于起步阶段。本研究系统总结了发酵蔬菜中微生物群落的组成特征和动态模式。我们综述了发酵蔬菜中噬菌体多样性和功能特性的最新研究进展。此外,通过整合多组学数据,我们深入了解了噬菌体、宿主微生物群和代谢产物之间复杂的相互作用网络。结果表明,噬菌体通过裂解-溶源循环介导微生物群落演替,以及通过编码的辅助代谢基因参与关键风味化合物的生物合成,精确调控发酵过程。最后,我们梳理出一个结合宏基因组学和培养组学的综合技术框架。本研究为理解噬菌体在发酵蔬菜中的功能机制提供了新的见解,为基于噬菌体调控开发精准发酵技术提供了理论基础。

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