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Toggling of NKG2A expression drives functional specialization of iPSC-derived CAR NK cells.

作者信息

Kanaya Minoru, Philippon Camille, Netskar Herman, Saetersmoen Michelle Lu, Cieslar-Pobuda Artur, Torralba-Raga Lamberto, Casoni Giovanna Perinetti, Hammer Quirin, Vincenti Marianna, Wiiger Merete T, Krokeide Silje, Hoel Hanna Julie, Ask Eivind Heggernes, Kosugi-Kanaya Mizuha, Kveberg Lise, Chu Hui-Yi, Groff Brian, Miller Jeffrey S, Lee Tom, Kaufman Dan S, Goodridge Jode Perinetti, Valameher Bahram, Pfefferle Aline, Malmberg Karl-Johan

出版信息

bioRxiv. 2025 Aug 23:2025.08.20.671199. doi: 10.1101/2025.08.20.671199.


DOI:10.1101/2025.08.20.671199
PMID:40894717
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12393553/
Abstract

Induced pluripotent stem cell (iPSC)-derived natural killer (iNK) cells offer a promising platform for off-the-shelf immunotherapy against hematological malignancies. NK cell function is dynamically regulated through education driven by inhibitory receptors, including CD94/NKG2A and killer cell immunoglobulin-like receptors (KIR). However, the acquisition of inhibitory receptors in iNK cells and their role during differentiation and education remains poorly defined. In this study, we monitored receptor repertoires, transcriptional states, and functional responses in a range of genetically engineered iNK cell lines. Transcriptional reference mapping placed iNK cells close to cytokine-activated NKG2A+ CD56dim peripheral blood (PB) NK cells. Despite their early differentiation stage, iNK cells displayed a well-developed cytotoxic effector program, which was also reflected in high protein expression of Eomes, granzyme B, and activating receptors DNAM-1 and NKG2D. Acquisition of NKG2A by iNK cells was associated with a more differentiated transcriptional state and superior functional responses against a broad range of targets, including those expressing low to moderate levels of HLA-E, suggesting attenuated inhibitory signaling through NKG2A in iNKs. CRISPR knockout of B2-microglobulin (B2M) in iNK cells revealed that the functional potency of NKG2A+ iNK cells was independent of educating interactions with HLA-E in cis or trans. Finally, CRISPR-mediated ablation of NKG2A led to a spontaneous compensatory surface expression of CD94/NKG2C heterodimers, associated with enhanced IFN-g production and cytotoxic activity against target cells with forced high expression of single-chain B2m-HLA-E-peptide trimers. Our results indicate an education-independent functional maturation of iNK cells, characterized by potent effector programs coupled with a favorable early-stage transcriptional profile.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/818a01be636f/nihpp-2025.08.20.671199v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/76922401f7c2/nihpp-2025.08.20.671199v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/b7977138ac2f/nihpp-2025.08.20.671199v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/2374fba2d894/nihpp-2025.08.20.671199v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/8837fbdea17a/nihpp-2025.08.20.671199v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/c106f09ea760/nihpp-2025.08.20.671199v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/818a01be636f/nihpp-2025.08.20.671199v1-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/76922401f7c2/nihpp-2025.08.20.671199v1-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/b7977138ac2f/nihpp-2025.08.20.671199v1-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/2374fba2d894/nihpp-2025.08.20.671199v1-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/8837fbdea17a/nihpp-2025.08.20.671199v1-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/c106f09ea760/nihpp-2025.08.20.671199v1-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/d2cb/12393553/818a01be636f/nihpp-2025.08.20.671199v1-f0006.jpg

相似文献

[1]
Toggling of NKG2A expression drives functional specialization of iPSC-derived CAR NK cells.

bioRxiv. 2025-8-23

[2]
iPSC-derived NK cells expressing high-affinity IgG Fc receptor fusion CD64/16A to mediate flexible, multi-tumor antigen targeting for lymphoma.

Front Immunol. 2024

[3]
Blocking NKG2A in Echinococcus multilocularis infection partially relieves impairment of NK cell function of the host.

Cell Mol Life Sci. 2025-8-2

[4]
Prescription of Controlled Substances: Benefits and Risks

2025-1

[5]
Hantaan virus-derived peptides that stabilize HLA-E could abrogate inhibition of CD56dimNKG2A+ NK cells.

PLoS Pathog. 2025-7-18

[6]
Disruption of the HLA-E/NKG2X axis is associated with uncontrolled HIV infections.

Front Immunol. 2022

[7]
Human iPSC-derived NK cells armed with CCL19, CCR2B, high-affinity CD16, IL-15, and NKG2D complex enhance anti-solid tumor activity.

Stem Cell Res Ther. 2025-7-15

[8]
Natural Killer Cell Receptors and Ligands Are Associated With Markers of HIV-1 Persistence in Chronically Infected ART Suppressed Patients.

Front Cell Infect Microbiol. 2022

[9]
Virus-free CRISPR knockin of a chimeric antigen receptor into KLRC1 generates potent GD2-specific natural killer cells.

Mol Ther. 2025-3-5

[10]
Expanded adaptive NKG2C+ NK cells exhibit potent ADCC and functional responses against HBV-infected hepatoma cell lines.

bioRxiv. 2025-5-30

本文引用的文献

[1]
Induced pluripotent stem-cell-derived CD19-directed chimeric antigen receptor natural killer cells in B-cell lymphoma: a phase 1, first-in-human trial.

Lancet. 2025-1-11

[2]
CRISPR/Cas9 editing of NKG2A improves the efficacy of primary CD33-directed chimeric antigen receptor natural killer cells.

Nat Commun. 2024-9-30

[3]
Genetic ablation of adhesion ligands mitigates rejection of allogeneic cellular immunotherapies.

Cell Stem Cell. 2024-9-5

[4]
Pan-cancer profiling of tumor-infiltrating natural killer cells through transcriptional reference mapping.

Nat Immunol. 2024-8

[5]
High-dimensional single-cell analysis of human natural killer cell heterogeneity.

Nat Immunol. 2024-8

[6]
IFNγ mediates the resistance of tumor cells to distinct NK cell subsets.

J Immunother Cancer. 2024-7-1

[7]
EFHD2 regulates T cell receptor signaling and modulates T helper cell activation in early sepsis.

Int Immunopharmacol. 2024-5-30

[8]
Precision off-the-shelf natural killer cell therapies for oncology with logic-gated gene circuits.

Cell Rep. 2024-5-28

[9]
Engineering immune-evasive allogeneic cellular immunotherapies.

Nat Rev Immunol. 2024-9

[10]
The MHC-E peptide ligands for checkpoint CD94/NKG2A are governed by inflammatory signals, whereas LILRB1/2 receptors are peptide indifferent.

Cell Rep. 2023-12-26

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