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The RNA degradation enzyme RNase E is essential for early flagellar assembly in .

作者信息

Wang Wei-Syuan, Chen Yu-Hsiang, Liou Gunn-Guang, Murashko Oleg N, Lin-Chao Sue

机构信息

Institute of Molecular Biology, Academia Sinica, Taipei 11529, Taiwan.

Molecular and Cell Biology, Taiwan International Graduate Program, Academia Sinica and Graduate Institute of Life Science, National Defense Medical Center, Taipei 11490, Taiwan.

出版信息

PNAS Nexus. 2025 Aug 18;4(9):pgaf269. doi: 10.1093/pnasnexus/pgaf269. eCollection 2025 Sep.


DOI:10.1093/pnasnexus/pgaf269
PMID:40894857
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC12399333/
Abstract

endoribonuclease E (RNase E), encoded by the essential gene and conserved across γ-Proteobacteria, plays a central role in RNA processing and decay. We show here that -null strain, -null strain complemented with catalytic-null RNase E mutant, and C-terminal-truncated strain (Rned500) all lack flagellar biogenesis and motility under both aerobic and anaerobic conditions, which are restored by wild-type RNase E complementation. The Rned500 displays dysregulated expression of the three-tiered flagellar transcriptional cascade, increased stability of flagellar mRNAs, and reduced flagellar protein levels through sRNA-dependent translational inhibition. However, ectopic expression of flagellar master regulators or flagellar proteins fails to restore flagellar biogenesis and motility. To investigate the underlying defect, we examined the cellular localization of the early flagellar structural protein FliF and found it mislocalized in Rned500, indicating a disruption of early flagellar assembly. This defect is further supported by the impaired secretion of the flagellar anti-sigma factor FlgM in Rned500, a process that requires a functional flagellar basal body. Complementation with wild-type RNase E in Rned500 fully restores expression of the flagellar cascade, proper membrane localization of FliF, flagella formation, and motility. Wild-type RNase E-expressing strains, but not Rned500, activate Toll-like receptor 5 (TLR5)-dependent nuclear factor-kappa B signaling in THP-1 human monocytic cells through flagellin. This response, confirmed by a TLR5 dual-luciferase reporter assay in transfected HEK293T human embryonic kidney cells, highlights RNase E's role in enabling flagellar expression required for cellular immune activation. Collectively, these results identify RNase E as a key flagellar biogenesis regulator, revealing novel posttranscriptional control mechanisms.

摘要
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/846dc6353387/pgaf269f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/1060eab71bd2/pgaf269f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/99acabdfc85c/pgaf269f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/8ba6934d5228/pgaf269f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/530b1017ed76/pgaf269f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/79a8a7e2e1cf/pgaf269f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/846dc6353387/pgaf269f6.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/1060eab71bd2/pgaf269f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/99acabdfc85c/pgaf269f2.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/8ba6934d5228/pgaf269f3.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/530b1017ed76/pgaf269f4.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/79a8a7e2e1cf/pgaf269f5.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/87e8/12399333/846dc6353387/pgaf269f6.jpg

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本文引用的文献

[1]
Selective RNA Processing and Stabilization are Multi-Layer and Stoichiometric Regulators of Gene Expression in Escherichia coli.

Adv Sci (Weinh). 2023-11

[2]
The stationary phase-specific sRNA FimR2 is a multifunctional regulator of bacterial motility, biofilm formation and virulence.

Nucleic Acids Res. 2022-11-11

[3]
Structure and Assembly of the Bacterial Flagellum.

Subcell Biochem. 2022

[4]
Regulation of flagellar motility and biosynthesis in enterohemorrhagic O157:H7.

Gut Microbes. 2022

[5]
Two (p)ppGpp Synthetase Genes, and , Are Involved in Regulating Cell Motility, Exopolysaccharides Production, and Biofilm Formation of .

Front Microbiol. 2022-3-29

[6]
Regulator of RNase E activity modulates the pathogenicity of Salmonella Typhimurium.

Microb Pathog. 2022-4

[7]
Stress adaptation and virulence in Vibrio alginolyticus is mediated by two (p)ppGpp synthetase genes, relA and spoT.

Microbiol Res. 2021-12

[8]
Nitric Oxide Impacts Human Gut Microbiota Diversity and Functionalities.

mSystems. 2021-10-26

[9]
Ribonucleases control distinct traits of Pseudomonas putida lifestyle.

Environ Microbiol. 2021-1

[10]
Oxygen battle in the gut: Hypoxia and hypoxia-inducible factors in metabolic and inflammatory responses in the intestine.

J Biol Chem. 2020-7-24

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