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正常和恶性造血过程中的表观转录组学进展。

Epitranscriptomic advances in normal and malignant hematopoiesis.

作者信息

Eleftheriou Maria, Russell James, Tzelepis Konstantinos

机构信息

Cambridge Stem Cell Institute, University of Cambridge, Cambridge, UK.

Department of Haematology, University of Cambridge, Cambridge, UK.

出版信息

Leukemia. 2025 Sep 19. doi: 10.1038/s41375-025-02765-6.

Abstract

RNA modifications, collectively termed the epitranscriptome, constitute a dynamic layer of post-transcriptional regulation that governs RNA splicing, stability, localization, translation, and decay. In the hematopoietic system, these chemical marks influence stem cell fate, lineage specification, immune surveillance, and malignant transformation through context-dependent regulation of mRNA, tRNA, rRNA, and non-coding RNAs. Here, we focus on RNA modifications and editing events with emerging mechanistic and translational relevance in normal and malignant hematopoiesis, highlighting those implicated in stem cell dynamics, leukemic progression, and therapeutic resistance. Specifically, we discuss N⁶-methyladenosine (m⁶A), 5-methylcytosine (m⁵C), N⁷-methylguanosine (m⁷G), N⁴-acetylcytidine (ac⁴C), pseudouridine (Ψ), adenosine-to-inosine (A-to-I) editing, and RNA glycosylation. Particular attention is given to enzymes such as METTL3, METTL1, ADAR1, and NAT10, whose dysregulation sustains leukemic stem cell programmes, promotes immune evasion, and confers treatment resistance. With the first-in-class METTL3 inhibitor STC-15 now in early-phase clinical trials in solid tumours (NCT05584111, NCT06975293), and additional RNA-modifying enzyme inhibitors advancing preclinically, these pathways are emerging as therapeutically tractable, including in hematological cancers. Furthermore, integrating epitranscriptomic profiles into genomic risk frameworks may also improve disease stratification, minimal residual disease (MRD) monitoring, and the identification of targetable vulnerabilities. Together, these insights position RNA modifications as central to blood cancer biology and support their integration into next-generation diagnostic, prognostic, and therapeutic strategies.

摘要

RNA修饰,统称为表观转录组,构成了转录后调控的一个动态层面,它控制着RNA剪接、稳定性、定位、翻译和降解。在造血系统中,这些化学标记通过对mRNA、tRNA、rRNA和非编码RNA的上下文依赖性调控,影响干细胞命运、谱系分化、免疫监视和恶性转化。在这里,我们聚焦于在正常和恶性造血过程中具有新出现的机制和转化相关性的RNA修饰和编辑事件,突出那些与干细胞动态、白血病进展和治疗抗性有关的事件。具体而言,我们讨论N⁶-甲基腺苷(m⁶A)、5-甲基胞嘧啶(m⁵C)、N⁷-甲基鸟苷(m⁷G)、N⁴-乙酰胞苷(ac⁴C)、假尿苷(Ψ)、腺苷到肌苷(A到I)编辑以及RNA糖基化。特别关注诸如METTL3、METTL1、ADAR1和NAT10等酶,它们的失调维持白血病干细胞程序、促进免疫逃逸并赋予治疗抗性。随着首个METTL3抑制剂STC-15目前正在实体瘤的早期临床试验中(NCT05584111,NCT0697529),以及其他RNA修饰酶抑制剂进入临床前研究,这些途径正逐渐成为可治疗的靶点,包括在血液系统癌症中。此外,将表观转录组图谱整合到基因组风险框架中也可能改善疾病分层、微小残留病(MRD)监测以及可靶向弱点的识别。总之,这些见解将RNA修饰定位为血癌生物学的核心,并支持将其整合到下一代诊断、预后和治疗策略中。

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