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溶液中39个碱基对的DNA片段的扭转和螺旋方向的测定。

Determination of twist and handedness of a 39-base pair segment of DNA in solution.

作者信息

Iwamoto S, Hsu M T

出版信息

Nature. 1983;305(5929):70-2. doi: 10.1038/305070a0.

DOI:10.1038/305070a0
PMID:6888552
Abstract

For DNA in solution, there have been two methods for measuring the helical periodicity. One method examines the ladder of discrete bands formed in the electrophoretic pattern of supercoiled DNA. Such a ladder is assumed to reflect the set of differently linked covalently closed molecules. The other method measures the lengths of partial nuclease digestions of DNA segments affixed to flat surfaces. Neither method, however, is able to measure the absolute handedness. X-ray diffraction of DNA oligonucleotides can determine the handedness, but the DNA must necessarily be crystallized. We have developed a new method for determining the helical parameters of a segment of DNA in solution. It is the first non-crystallographic method that can directly determine both the helical periodicity and the absolute handedness of DNA. The results obtained using this method are consistent with the classical Watson-Crick right-handed double helical model.

摘要

对于溶液中的DNA,有两种测量螺旋周期性的方法。一种方法是检查超螺旋DNA电泳图谱中形成的离散条带阶梯。这种阶梯被认为反映了一组不同连接的共价闭合分子。另一种方法是测量固定在平面上的DNA片段的部分核酸酶消化长度。然而,这两种方法都无法测量绝对手性。DNA寡核苷酸的X射线衍射可以确定手性,但DNA必须结晶。我们开发了一种新方法来确定溶液中一段DNA的螺旋参数。这是第一种能够直接确定DNA螺旋周期性和绝对手性的非晶体学方法。使用该方法获得的结果与经典的沃森-克里克右手双螺旋模型一致。

相似文献

1
Determination of twist and handedness of a 39-base pair segment of DNA in solution.溶液中39个碱基对的DNA片段的扭转和螺旋方向的测定。
Nature. 1983;305(5929):70-2. doi: 10.1038/305070a0.
2
Determination of DNA helical handedness by fluorescence resonance energy transfer.通过荧光共振能量转移测定DNA螺旋手性
J Mol Biol. 1996 Apr 5;257(3):597-617. doi: 10.1006/jmbi.1996.0188.
3
The helical repeat of underwound DNA in solution.
Nucleic Acids Res. 1988 Jul 25;16(14A):6607-16. doi: 10.1093/nar/16.14.6607.
4
The helical repeat of double-stranded DNA varies as a function of catenation and supercoiling.双链DNA的螺旋重复会根据连环化和超螺旋情况而变化。
Nature. 1988 Aug 4;334(6181):448-50. doi: 10.1038/334448a0.
5
The intrinsic curvature of DNA in solution.
J Mol Biol. 1988 May 5;201(1):127-37. doi: 10.1016/0022-2836(88)90444-5.
6
DNA duplex with the potential to change handedness after every half a turn.每半圈就有可能改变螺旋方向的DNA双链。
Nucleic Acids Res. 1989 Sep 25;17(18):7273-81. doi: 10.1093/nar/17.18.7273.
7
Parallel-stranded DNA under topological stress: rearrangement of (dA)15.(dT)15 to a d(A.A.T)n triplex.拓扑应力下的平行链DNA:(dA)15.(dT)15重排为d(A.A.T)n三链体
Nucleic Acids Res. 1991 Dec;19(25):7145-54. doi: 10.1093/nar/19.25.7145.
8
Energetics of B-to-Z transition in DNA.DNA中B型到Z型转变的能量学
Proc Natl Acad Sci U S A. 1983 Oct;80(20):6206-10. doi: 10.1073/pnas.80.20.6206.
9
Helical repeat of DNA in solution.溶液中DNA的螺旋重复序列。
Proc Natl Acad Sci U S A. 1979 Jan;76(1):200-3. doi: 10.1073/pnas.76.1.200.
10
Determination of linking number of pBR322 DNA.
Sci Sin B. 1983 Jun;26(6):602-13.

引用本文的文献

1
Transcription unit mapping in adenovirus: regions of termination.腺病毒中的转录单位图谱:终止区域
J Virol. 1986 Jul;59(1):112-9. doi: 10.1128/JVI.59.1.112-119.1986.
2
Linear adenovirus DNA is organized into supercoiled domains in virus particles.线性腺病毒DNA在病毒颗粒中被组织成超螺旋结构域。
Nucleic Acids Res. 1989 May 11;17(9):3535-50. doi: 10.1093/nar/17.9.3535.