Anderson D C, Dahlquist F W
Biochemistry. 1982 Jul 20;21(15):3569-78. doi: 10.1021/bi00258a007.
The substrate analogue 2,2,2-trifluoroethanol (TFE) has been used as a 19F NMR probe of the active site of alcohol dehydrogenase from horse liver (LADH). We are able to directly observe a single resonance assigned to TFE in its ternary complex with LADH and nicotinamide adenine dinucleotide (NAD). The chemical shift of this resonance is independent of pH between values of 6.2 and 8.9, suggesting that bound TFE does not change ionization state in this range. Both by 19F NMR self-exchange measurements and by ligand-displacement studies with pyrazole, we also find that displacement of TFE from its ternary complex with NAD is a linear function of proton concentration over a similar pH range, with more rapid desorption occurring at lower pH values. This suggests that the pK of 6.4 for this process seen previously by Kvassman and Pettersson [Kvassman, J., & Pettersson, G. (1980) Eur. J. Biochem. 103, 557] is not due to the ionization of bound TFE. These studies also show that the bound lifetime of TFE in its ternary complex with LADH and NAD is quite long (400s) at pH 8.7, suggesting the use of TFE as a kinetic trapping reagent in single-turnover stopped-flow experiments. Binding isotherms of NAD to LADH saturated with TFE at pH 8.7 or with pyrazole at pH 7.5 reveal essentially no cooperative behavior. The displacement time courses described above are all adequately fit as first-order processes, thus giving no evidence for site heterogeneity or site-site interaction in the binding of these ligands to dimeric LADH. TFE and pyrazole are used as reagents to further explore the question of site-site interaction from a kinetic point of view in the following paper [Anderson, D. C., & Dahlquist, F.W. (1982) Biochemistry (following paper in this issue)].
底物类似物2,2,2-三氟乙醇(TFE)已被用作马肝醇脱氢酶(LADH)活性位点的19F核磁共振探针。我们能够直接观察到在其与LADH和烟酰胺腺嘌呤二核苷酸(NAD)的三元复合物中归属于TFE的单一共振峰。该共振峰的化学位移在6.2至8.9的pH值范围内与pH无关,这表明结合的TFE在此范围内不会改变其电离状态。通过19F核磁共振自交换测量以及用吡唑进行的配体置换研究,我们还发现,在类似的pH范围内,TFE从其与NAD的三元复合物中的置换是质子浓度的线性函数,在较低pH值下解吸更快。这表明先前Kvassman和Pettersson [Kvassman, J., & Pettersson, G. (1980) Eur. J. Biochem. 103, 557]观察到的该过程的pK为6.4并非由于结合的TFE的电离。这些研究还表明,在pH 8.7时,TFE在其与LADH和NAD的三元复合物中的结合寿命相当长(400秒),这表明在单周转停流实验中可将TFE用作动力学捕获试剂。在pH 8.7下用TFE饱和或在pH 7.5下用吡唑饱和的情况下,NAD与LADH的结合等温线基本没有协同行为。上述置换时间进程均能很好地拟合为一级过程,因此没有证据表明这些配体与二聚体LADH结合时存在位点异质性或位点间相互作用。在接下来的论文中[Anderson, D. C., & Dahlquist, F.W. (1982) Biochemistry(本期后续论文)],TFE和吡唑被用作试剂,从动力学角度进一步探讨位点间相互作用的问题。