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聚合物和盐诱导的六方DNA环面

Polymer- and salt-induced toroids of hexagonal DNA.

作者信息

Ubbink J, Odijk T

机构信息

Department of Polymer Technology, Faculty of Chemical Engineering and Materials Science, Delft University of Technology, The Netherlands.

出版信息

Biophys J. 1995 Jan;68(1):54-61. doi: 10.1016/S0006-3495(95)80158-X.

Abstract

A model is proposed for polymer- and salt-induced toroidal condensates of DNA, based on a recent theory of the undulation enhancement of the electrostatic interaction in the bulk hexagonal phase of semiflexible polyions. In a continuum approximation, the thermodynamic potential of a monomolecular toroid may be split up in bulk, surface, and curvature contributions. With the help of an approximate analytical minimization procedure, the optimal torus dimensions are calculated as a function of the concentrations of inert polymer and added salt. The stability of the torus is analyzed in terms of its surface tension and a bulk melting criterion. The theory should be applicable to psi-toroids that are not too thick.

摘要

基于半柔性聚离子本体六方相中静电相互作用波动增强的最新理论,提出了一种聚合物和盐诱导的DNA环形凝聚物模型。在连续介质近似中,单分子环面的热力学势可分为本体、表面和曲率贡献。借助近似解析最小化程序,计算出最佳环面尺寸作为惰性聚合物和添加盐浓度的函数。根据环面的表面张力和本体熔化判据分析其稳定性。该理论应适用于不太厚的ψ-环面。

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本文引用的文献

1
6
A transition to a compact form of DNA in polymer solutions.在聚合物溶液中向紧密形式的DNA转变。
Proc Natl Acad Sci U S A. 1971 Aug;68(8):1886-90. doi: 10.1073/pnas.68.8.1886.
8
A compact form of double-stranded DNA in solution.溶液中双链DNA的紧密形式。
FEBS Lett. 1972 Jun 15;23(2):180-4. doi: 10.1016/0014-5793(72)80335-1.
10
The structure of psi DNA.ψ DNA的结构。
J Mol Biol. 1974 Mar 25;84(1):37-64. doi: 10.1016/0022-2836(74)90211-3.

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