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体内ColE1 cer和NTP16核磁共振位点之间的位点特异性重组。

Site-specific recombination between ColE1 cer and NTP16 nmr sites in vivo.

作者信息

Zakova N, Szatmari G B

机构信息

Département de microbiologie et immunologie, Université de Montréal, Québec, Canada.

出版信息

Mol Gen Genet. 1995 May 20;247(4):509-14. doi: 10.1007/BF00293154.

DOI:10.1007/BF00293154
PMID:7770060
Abstract

The site-specific recombination system used by multicopy plasmids of the ColE1 family uses two identical plasmid-encoded recombination sites and four bacterial proteins to catalyze the recombination reaction. In the case of the Escherichia coli plasmid ColE1, the recombination site, cer, is a 280 bp DNA sequence which is acted on by the products of the argR, pepA, xerC and xerD genes. We have constructed a model system to study this recombination system, using tandemly repeated recombination sites from the plasmids ColE1 and NTP16. These plasmids have allowed us precisely to define the region of strand exchange during site-specific recombination, and to derive a model for cer intramolecular site-specific recombination.

摘要

ColE1家族多拷贝质粒所使用的位点特异性重组系统利用两个相同的质粒编码重组位点和四种细菌蛋白来催化重组反应。以大肠杆菌质粒ColE1为例,其重组位点cer是一段280 bp的DNA序列,受argR、pepA、xerC和xerD基因的产物作用。我们构建了一个模型系统来研究这个重组系统,使用来自质粒ColE1和NTP16的串联重复重组位点。这些质粒使我们能够精确界定位点特异性重组过程中的链交换区域,并推导出cer分子内位点特异性重组的模型。

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1
Site-specific recombination between ColE1 cer and NTP16 nmr sites in vivo.体内ColE1 cer和NTP16核磁共振位点之间的位点特异性重组。
Mol Gen Genet. 1995 May 20;247(4):509-14. doi: 10.1007/BF00293154.
2
Xer-mediated site-specific recombination in vitro.体外Xer介导的位点特异性重组
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Involvement of ArgR and PepA in the pairing of ColE1 dimer resolution sites.精氨酸阻遏蛋白(ArgR)和肽酶A(PepA)参与大肠杆菌ColE1二聚体解离位点的配对。
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Analysis of pCERC7, a small antibiotic resistance plasmid from a commensal ST131 Escherichia coli, defines a diverse group of plasmids that include various segments adjacent to a multimer resolution site and encode the same NikA relaxase accessory protein enabling mobilisation.对来自共生ST131大肠杆菌的小型抗生素抗性质粒pCERC7的分析,确定了一组多样的质粒,这些质粒包括与多聚体分辨率位点相邻的各种片段,并编码相同的NikA松弛酶辅助蛋白以实现转移。
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Stability by multimer resolution of pJHCMW1 is due to the Tn1331 resolvase and not to the Escherichia coli Xer system.pJHCMW1通过多聚体解离实现的稳定性归因于Tn1331解离酶,而非大肠杆菌Xer系统。
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Derivatives of ColE1 cer show altered topological specificity in site-specific recombination.ColE1 cer的衍生物在位点特异性重组中表现出改变的拓扑特异性。
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Determinants of selectivity in Xer site-specific recombination.Xer位点特异性重组中选择性的决定因素。
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Xer-mediated site-specific recombination at cer generates Holliday junctions in vivo.Xer介导的cer位点特异性重组在体内产生霍利迪连接体。
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Recombination at ColE1 cer requires the Escherichia coli xerC gene product, a member of the lambda integrase family of site-specific recombinases.ColE1 cer位点的重组需要大肠杆菌xerC基因产物,它是位点特异性重组酶的λ整合酶家族的成员。
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The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus.精氨酸阻遏物对于ColE1 cer位点处质粒稳定的位点特异性重组至关重要。
EMBO J. 1988 Dec 20;7(13):4389-95. doi: 10.1002/j.1460-2075.1988.tb03338.x.

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Structural plasmid evolution as a result of coupled recombinations at bom and cer sites.

本文引用的文献

1
Two related recombinases are required for site-specific recombination at dif and cer in E. coli K12.在大肠杆菌K12中,dif和cer位点特异性重组需要两种相关的重组酶。
Cell. 1993 Oct 22;75(2):351-61. doi: 10.1016/0092-8674(93)80076-q.
2
Site-specific genetic recombination: hops, flips, and flops.位点特异性基因重组:跳跃、翻转与摆动
FASEB J. 1993 Jun;7(9):760-7. doi: 10.1096/fasebj.7.9.8392474.
3
Plasmid pSC101 harbors a recombination site, psi, which is able to resolve plasmid multimers and to substitute for the analogous chromosomal Escherichia coli site dif.
由于在bom和cer位点的偶联重组导致的结构性质粒进化。
Mol Genet Genomics. 2003 Dec;270(5):415-9. doi: 10.1007/s00438-003-0933-0. Epub 2003 Oct 16.
质粒pSC101含有一个重组位点psi,它能够拆分质粒多聚体并替代大肠杆菌染色体上类似的位点dif。
J Bacteriol. 1994 Jun;176(11):3188-95. doi: 10.1128/jb.176.11.3188-3195.1994.
4
Multimerization of high copy number plasmids causes instability: CoIE1 encodes a determinant essential for plasmid monomerization and stability.高拷贝数质粒的多聚化会导致不稳定性:ColE1编码一个对质粒单体化和稳定性至关重要的决定因素。
Cell. 1984 Apr;36(4):1097-103. doi: 10.1016/0092-8674(84)90060-6.
5
Pedigrees of some mutant strains of Escherichia coli K-12.大肠杆菌K-12某些突变菌株的谱系。
Bacteriol Rev. 1972 Dec;36(4):525-57. doi: 10.1128/br.36.4.525-557.1972.
6
Resolution of ColE1 dimers requires a DNA sequence implicated in the three-dimensional organization of the cer site.ColE1 二聚体的解离需要一段与 cer 位点三维结构相关的 DNA 序列。
EMBO J. 1988 Mar;7(3):851-8. doi: 10.1002/j.1460-2075.1988.tb02884.x.
7
The arginine repressor is essential for plasmid-stabilizing site-specific recombination at the ColE1 cer locus.精氨酸阻遏物对于ColE1 cer位点处质粒稳定的位点特异性重组至关重要。
EMBO J. 1988 Dec 20;7(13):4389-95. doi: 10.1002/j.1460-2075.1988.tb03338.x.
8
Nucleotide sequence of the argR gene of Escherichia coli K-12 and isolation of its product, the arginine repressor.大肠杆菌K-12的argR基因的核苷酸序列及其产物精氨酸阻遏物的分离
Proc Natl Acad Sci U S A. 1987 Oct;84(19):6697-701. doi: 10.1073/pnas.84.19.6697.
9
Multimer resolution systems of ColE1 and ColK: localisation of the crossover site.大肠杆菌素E1和大肠杆菌素K的多聚体解析系统:交叉位点的定位
Mol Gen Genet. 1985;201(2):334-8. doi: 10.1007/BF00425680.
10
Improved M13 phage cloning vectors and host strains: nucleotide sequences of the M13mp18 and pUC19 vectors.改良的M13噬菌体克隆载体和宿主菌株:M13mp18和pUC19载体的核苷酸序列。
Gene. 1985;33(1):103-19. doi: 10.1016/0378-1119(85)90120-9.