Gustchina A, Zdanov A, Schalk-Hihi C, Wlodawer A
NCI-Frederick Cancer Research and Development Center, ABL-Basic Research Program, Maryland 21702, USA.
Proteins. 1995 Feb;21(2):140-8. doi: 10.1002/prot.340210208.
A three-dimensional model of interleukin-4 (IL-4) bound to one molecule each of the high- and low-affinity receptors (IL-4R and IL-2R gamma) was built, using the crystal structure of the complex of human growth hormone (HGH) with its receptor (HGHR) as a starting model. The modeling of IL-4 with its receptors was based on the conservation of the sequences and on the predicted structural organization for cytokine receptors, and assuming that the binding mode of the ligands would be similar. Analysis of the interface between IL-4 and both receptor molecules was carried out to reveal which residues are important for complex formation. The modeling procedures showed that there were no major problems in maintaining a reasonable fit of IL-4 with the two receptor molecules, in a manner analogous to the complex of HGH-HGHR. Many of the residues that appear by modeling to be important for binding between IL-4 and the receptors have been previously implicated in that role by different methods. A striking motif of aromatic and positively charged residues on the surface of the C-terminal domains of the receptors is highly conserved in the structure of HGH-HGHR and in the models of IL-4 complexed with its receptors.
利用人生长激素(HGH)与其受体(HGHR)复合物的晶体结构作为起始模型,构建了与高亲和力和低亲和力受体(IL-4R和IL-2Rγ)各一个分子结合的白细胞介素-4(IL-4)三维模型。IL-4与其受体的建模基于序列保守性以及细胞因子受体的预测结构组织,并假设配体的结合模式相似。对IL-4与两个受体分子之间的界面进行分析,以揭示哪些残基对于复合物形成很重要。建模过程表明,以类似于HGH-HGHR复合物的方式使IL-4与两个受体分子保持合理匹配没有重大问题。通过建模显示对IL-4与受体之间结合很重要的许多残基,此前已通过不同方法表明其具有该作用。受体C末端结构域表面芳香族和带正电荷残基的一个显著基序在HGH-HGHR结构以及与受体复合的IL-4模型中高度保守。