• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌转录因子FNR中激活区域的位置与方向

Location and orientation of an activating region in the Escherichia coli transcription factor, FNR.

作者信息

Bell A, Busby S

机构信息

School of Biochemistry, University of Birmingham, UK.

出版信息

Mol Microbiol. 1994 Jan;11(2):383-90. doi: 10.1111/j.1365-2958.1994.tb00318.x.

DOI:10.1111/j.1365-2958.1994.tb00318.x
PMID:8170400
Abstract

We have characterized a number of mutations in fnr that interfere with FNR-dependent transcription activation at two promoters where the FNR-binding site is centred around 41 1/2 bp upstream from the transcription start site. The substituted residues in all but one of these FNR mutants are clustered around a presumed surface-exposed beta-turn containing G85 which, we suggest, forms an activating region that contacts RNA polymerase at these promoters. Using the 'oriented heterodimers' method described elsewhere, we show that this activating region on the promoter-proximal subunit of the FNR dimer is sufficient to activate transcription initiation. In contrast, this region is not essential for activation of a third FNR-dependent promoter where the FNR-binding site is centred at 61 1/2 bp upstream from the transcription start site. However, a substitution at S73 interferes with FNR-dependent activation at both this promoter and promoters in which the FNR site is located at 41 1/2 bp from the transcript start, suggesting that FNR may contain a second activating region.

摘要

我们已经鉴定出fnr中的一些突变,这些突变会干扰两个启动子处FNR依赖的转录激活,在这两个启动子中,FNR结合位点位于转录起始位点上游约41.5 bp处的中心位置。除了一个FNR突变体之外,所有这些突变体中被取代的残基都聚集在一个推测的表面暴露的β-转角周围,该β-转角包含G85,我们认为它形成了一个在这些启动子处与RNA聚合酶接触的激活区域。使用在其他地方描述的“定向异二聚体”方法,我们表明FNR二聚体的启动子近端亚基上的这个激活区域足以激活转录起始。相比之下,该区域对于激活第三个FNR依赖的启动子不是必需的,在这个启动子中,FNR结合位点位于转录起始位点上游61.5 bp处的中心位置。然而,S73处的取代会干扰该启动子以及FNR位点位于距转录起始41.5 bp处的启动子的FNR依赖的激活,这表明FNR可能包含第二个激活区域。

相似文献

1
Location and orientation of an activating region in the Escherichia coli transcription factor, FNR.大肠杆菌转录因子FNR中激活区域的位置与方向
Mol Microbiol. 1994 Jan;11(2):383-90. doi: 10.1111/j.1365-2958.1994.tb00318.x.
2
Transcriptional co-activation at the ansB promoters: involvement of the activating regions of CRP and FNR when bound in tandem.ansB启动子处的转录共激活:CRP和FNR串联结合时激活区域的作用。
Mol Microbiol. 1995 Nov;18(3):521-31. doi: 10.1111/j.1365-2958.1995.mmi_18030521.x.
3
Spacing requirements for transcription activation by Escherichia coli FNR protein.大肠杆菌FNR蛋白转录激活的间隔要求。
J Bacteriol. 1995 Dec;177(23):6704-10. doi: 10.1128/jb.177.23.6704-6710.1995.
4
Downregulation of Escherichia coli yfiD expression by FNR occupying a site at -93.5 involves the AR1-containing face of FNR.FNR占据-93.5位点对大肠杆菌yfiD表达的下调涉及FNR含AR1的面。
Mol Microbiol. 1998 Aug;29(4):1113-23. doi: 10.1046/j.1365-2958.1998.01002.x.
5
Transcription activation at class I FNR-dependent promoters: identification of the activating surface of FNR and the corresponding contact site in the C-terminal domain of the RNA polymerase alpha subunit.I类FNR依赖性启动子的转录激活:FNR激活表面及RNA聚合酶α亚基C末端结构域中相应接触位点的鉴定
Nucleic Acids Res. 1997 Oct 15;25(20):4028-34. doi: 10.1093/nar/25.20.4028.
6
Promoter sequence requirements for Fnr-dependent activation of transcription of the narGHJI operon.Fnr 依赖型激活 narGHJI 操纵子转录的启动子序列要求。
Mol Microbiol. 1991 Feb;5(2):353-60. doi: 10.1111/j.1365-2958.1991.tb02116.x.
7
The molecular basis for the differential regulation of the hlyE-encoded haemolysin of Escherichia coli by FNR and HlyX lies in the improved activating region 1 contact of HlyX.FNR和HlyX对大肠杆菌hlyE编码的溶血素进行差异调节的分子基础在于HlyX改善的激活区域1接触。
Microbiology (Reading). 1997 Dec;143 ( Pt 12):3785-3793. doi: 10.1099/00221287-143-12-3785.
8
Definition of nitrite and nitrate response elements at the anaerobically inducible Escherichia coli nirB promoter: interactions between FNR and NarL.厌氧诱导型大肠杆菌nirB启动子中亚硝酸盐和硝酸盐反应元件的定义:FNR与NarL之间的相互作用
Mol Microbiol. 1993 Jan;7(1):151-7. doi: 10.1111/j.1365-2958.1993.tb01106.x.
9
Transcriptional activation by FNR and CRP: reciprocity of binding-site recognition.FNR和CRP的转录激活:结合位点识别的相互作用
Mol Microbiol. 1997 Feb;23(4):835-45. doi: 10.1046/j.1365-2958.1997.2811637.x.
10
Additional determinants within Escherichia coli FNR activating region 1 and RNA polymerase alpha subunit required for transcription activation.大肠杆菌FNR激活区域1内以及转录激活所需的RNA聚合酶α亚基中的其他决定因素。
J Bacteriol. 2005 Mar;187(5):1724-31. doi: 10.1128/JB.187.5.1724-1731.2005.

引用本文的文献

1
Structures of the cyanobacterial nitrogen regulators NtcA and PipX complexed to DNA shed light on DNA binding by NtcA and implicate PipX in the recruitment of RNA polymerase.与DNA复合的蓝藻氮调节因子NtcA和PipX的结构揭示了NtcA与DNA的结合,并表明PipX参与RNA聚合酶的募集。
Nucleic Acids Res. 2025 Feb 8;53(4). doi: 10.1093/nar/gkaf096.
2
N- and C-terminal regions of the quorum-sensing activator TraR cooperate in interactions with the alpha and sigma-70 components of RNA polymerase.群体感应激活因子TraR的N端和C端区域在与RNA聚合酶的α亚基和σ-70亚基相互作用时协同发挥作用。
Mol Microbiol. 2009 Oct;74(2):330-46. doi: 10.1111/j.1365-2958.2009.06865.x. Epub 2009 Sep 2.
3
Identification of amino acid residues of the pheromone-binding domain of the transcription factor TraR that are required for positive control.
鉴定转录因子TraR的信息素结合结构域中对正向调控必需的氨基酸残基。
Mol Microbiol. 2009 Aug;73(3):341-51. doi: 10.1111/j.1365-2958.2009.06755.x. Epub 2009 Jul 6.
4
Characterization of CprK1, a CRP/FNR-type transcriptional regulator of halorespiration from Desulfitobacterium hafniense.嗜热栖热脱硫杆菌中卤呼吸作用的CRP/FNR型转录调节因子CprK1的特性分析
J Bacteriol. 2006 Apr;188(7):2604-13. doi: 10.1128/JB.188.7.2604-2613.2006.
5
Oxygen-dependent regulation of the central pathway for the anaerobic catabolism of aromatic compounds in Azoarcus sp. strain CIB.偶氮弧菌属菌株CIB中芳香族化合物厌氧分解代谢中心途径的氧依赖性调控
J Bacteriol. 2006 Apr;188(7):2343-54. doi: 10.1128/JB.188.7.2343-2354.2006.
6
Fnr-, NarP- and NarL-dependent regulation of transcription initiation from the Haemophilus influenzae Rd napF (periplasmic nitrate reductase) promoter in Escherichia coli K-12.大肠杆菌K-12中流感嗜血杆菌Rd napF(周质硝酸还原酶)启动子转录起始的Fnr、NarP和NarL依赖性调控
J Bacteriol. 2005 Oct;187(20):6928-35. doi: 10.1128/JB.187.20.6928-6935.2005.
7
An FNR-type regulator controls the anaerobic expression of hyn hydrogenase in Thiocapsa roseopersicina.一种FNR型调控因子控制玫瑰色硫荚菌中hyn氢化酶的厌氧表达。
J Bacteriol. 2005 Apr;187(8):2618-27. doi: 10.1128/JB.187.8.2618-2627.2005.
8
Additional determinants within Escherichia coli FNR activating region 1 and RNA polymerase alpha subunit required for transcription activation.大肠杆菌FNR激活区域1内以及转录激活所需的RNA聚合酶α亚基中的其他决定因素。
J Bacteriol. 2005 Mar;187(5):1724-31. doi: 10.1128/JB.187.5.1724-1731.2005.
9
CO-sensing mechanisms.一氧化碳传感机制。
Microbiol Mol Biol Rev. 2004 Sep;68(3):453-73, table of contents. doi: 10.1128/MMBR.68.3.453-473.2004.
10
Transcription regulation by tandem-bound FNR at Escherichia coli promoters.大肠杆菌启动子处串联结合的FNR对转录的调控
J Bacteriol. 2003 Oct;185(20):5993-6004. doi: 10.1128/JB.185.20.5993-6004.2003.