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海兔(Val(E7))和抹香鲸双突变体His(E7)→Val、Thr(E10)→Arg高铁肌红蛋白中轴向配位pH调节动力学的1H NMR研究

1H NMR study of the dynamics of the pH modulation of axial coordination in Aplysia limacina (Val(E7)) and sperm whale double mutant His(E7)-->Val,Thr(E10)-->Arg metmyoglobin.

作者信息

Qin J, Pande U, La Mar G N, Ascoli F, Ascenzi P, Cutruzzolá F, Travaglini-Allocatelli C, Brunori M

机构信息

Department of Chemistry, University of California, Davis 95616.

出版信息

J Biol Chem. 1993 Nov 15;268(32):24012-21.

PMID:8226945
Abstract

The molecular and electronic structure, thermodynamics, dynamics, and mechanism of interconversion of the pH-modulated reversible equilibria of Aplysia limacina metmyoglobin, (metMb), have been investigated by 1H NMR spectroscopy. The four identified species which interconvert slowly on the NMR time scale (lifetime > 1 ms) are metMbOH (B) at alkaline pH, five coordinate metMb (N) at acidic to neutral pH, an acidic form, A, near pH approximately 4 and an extremely low pH form, D, attributed to an equilibrium unfolded species. The presence of strong distal hydrogen bonding by Arg (E10) to bound hydroxide is detected via a significant solvent isotope effect on the metMbOH (B) hyperfine shifts. Integration of the peak intensities yields pK values of 7.7 and approximately 4 for the B<-->N and N<-->A equilibria, respectively. Saturation transfer via chemical exchange is observed for B<-->N and N<-->A, where the rates for forming metMbOH (B) and the acidic form A from N are base- and acid-catalyzed, respectively, while the reverse rates are first-order. The much slower interconversion rate for N<-->B in A. limacina metMb than His(E7) containing mammalian metMb is attributed to the fact that a ligand bond is broken rather than just proton transferred and that the equilibrium involves a major rearrangement of the orientation of Arg(E10). This conclusion is supported by 1H NMR data for the sperm whale double mutant His(E7)-->Val/Thr(E10)-->Arg metMb, which exhibits a pK approximately 8.7 for the equilibrium between five-coordinate metMb (N) and metMbOH (B) with an even slower interconversion rate than in A. limacina metMb. This double mutant metMbOH (B) exhibits hydrogen bonding by Arg (E10) with coordinated hydroxide similar to that in A. limacina metMbOH. The slow but acid-catalyzed rates of conversion of A. limacina metMb (N) to the acid species A with significantly weakened bonding of the heme iron to the axial His(F8) residue is consistent with protonation of an inaccessible residue and/or a structural change accompanying the protonation equilibrium. It is concluded that metMb will coordinate water strongly only when there is a distal hydrogen bond acceptor residue, while the hydroxide ion is coordinated strongly only if there is a distal hydrogen bond donor residue.

摘要

通过1H NMR光谱研究了海兔(Aplysia limacina)高铁肌红蛋白(metMb)pH调节的可逆平衡的分子和电子结构、热力学、动力学及相互转化机制。在NMR时间尺度上缓慢相互转化(寿命>1 ms)的四种已鉴定物种分别是碱性pH下的metMbOH(B)、酸性至中性pH下的五配位metMb(N)、pH约为4附近的酸性形式A以及归因于平衡展开物种的极低pH形式D。通过对metMbOH(B)超精细位移的显著溶剂同位素效应,检测到精氨酸(E10)与结合的氢氧根之间存在强的远端氢键。峰强度积分分别得出B<-->N和N<-->A平衡的pK值为7.7和约4。观察到B<-->N和N<-->A之间通过化学交换的饱和转移,其中从N形成metMbOH(B)和酸性形式A的速率分别由碱催化和酸催化,而逆向速率为一级反应。海兔metMb中N<-->B的相互转化速率比含组氨酸(E7)的哺乳动物metMb慢得多,这归因于配体键断裂而非仅仅质子转移,且平衡涉及精氨酸(E10)取向的重大重排。抹香鲸双突变体His(E7)-->Val/Thr(E10)-->Arg metMb的1H NMR数据支持了这一结论,该双突变体在五配位metMb(N)和metMbOH(B)之间的平衡pK约为8.7,其相互转化速率比海兔metMb更慢。这种双突变体metMbOH(B)表现出精氨酸(E10)与配位氢氧根之间的氢键,类似于海兔metMbOH中的情况。海兔metMb(N)缓慢但酸催化转化为酸性物种A,同时血红素铁与轴向组氨酸(F8)残基的结合显著减弱,这与难以接近的残基质子化和/或质子化平衡伴随的结构变化一致。得出的结论是,只有当存在远端氢键受体残基时,metMb才会强烈配位水,而只有当存在远端氢键供体残基时,氢氧根离子才会强烈配位。

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