• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

大肠杆菌SecA(转运ATP酶)高亲和力ATP结合位点中潜在催化残基天冬氨酸-133的特性分析

Characterization of a potential catalytic residue, Asp-133, in the high affinity ATP-binding site of Escherichia coli SecA, translocation ATPase.

作者信息

Sato K, Mori H, Yoshida M, Mizushima S

机构信息

Research Laboratory of Resources Utilization, Tokyo Institute of Technology, Nagatsuta 4259, Yokohama 226, Japan.

出版信息

J Biol Chem. 1996 Jul 19;271(29):17439-44. doi: 10.1074/jbc.271.29.17439.

DOI:10.1074/jbc.271.29.17439
PMID:8663354
Abstract

The high affinity ATP-binding site of SecA is located in its amino-terminal domain possessing amino acid sequences, the Walker A (GXXXXGKT) and B (ZZZZD) motifs, that are characteristic of a major class of nucleotide-binding sites (Walker, J. E., Saraste, M., Runswick, M. J., and Gay, N. J. (1982) EMBO J. 1, 945-951). Recently, we proposed that proteins possessing a typical set of Walker A and B motifs contain a conserved Glu or Asp between the two motifs. This Glu or Asp acts as a "catalytic residue" that activates a water molecule for an in-line attack on the gamma-phosphate of ATP (Amano, T., Yoshida, M., Matsuo, Y., and Nishikawa, K.(1995) FEBS Lett. 359, 1-5). In the present study, the aspartate residue at position 133 in Escherichia coli SecA, which could be the "catalytic residue," was mutated to an asparagine. The mutant SecA (SecA D133N) protein was expressed in E. coli CK4706, encoding a duplication of the secA gene, and purified to homogeneity. The in vitro protein translocation activity and membrane vesicle stimulated ATPase activity of SecA D133N were drastically reduced. Proteolytic studies indicated that the conformational changes of the mutant SecA occurring on interaction with ATP, presecretory proteins, phospholipids, and membrane vesicles, were similar to those of wild-type SecA. The mutant SecA allowed the signal peptide cleavage of proOmpA during translocation, indicating that the mutant retains the ability to bind ATP to perform the initial step of the translocation reaction. These data indicate that the carboxyl group of Asp-133 plays a role as a catalytic carboxylate, which activates a water molecule to attack gamma-phosphate of ATP, and the mutant lacking this residue cannot perform the total translocation but can still perform the initial step of the protein translocation.

摘要

SecA的高亲和力ATP结合位点位于其氨基末端结构域,该结构域拥有氨基酸序列,即沃克A基序(GXXXXGKT)和沃克B基序(ZZZZD),它们是一大类核苷酸结合位点的特征序列(沃克,J.E.,萨拉斯特,M.,伦斯威克,M.J.,和盖伊,N.J.(1982年)《欧洲分子生物学组织杂志》1,945 - 951)。最近,我们提出拥有一组典型沃克A和沃克B基序的蛋白质在这两个基序之间含有一个保守的谷氨酸或天冬氨酸。这个谷氨酸或天冬氨酸作为一个“催化残基”,激活一个水分子以对ATP的γ - 磷酸基团进行亲核攻击(天野,T.,吉田,M.,松尾,Y.,和西川,K.(1995年)《欧洲生物化学学会联合会快报》359,1 - 5)。在本研究中,大肠杆菌SecA中第133位的天冬氨酸残基,可能是“催化残基”,被突变为天冬酰胺。突变型SecA(SecA D133N)蛋白在编码secA基因重复序列的大肠杆菌CK4706中表达,并纯化至同质。SecA D133N的体外蛋白质转运活性和膜囊泡刺激的ATP酶活性大幅降低。蛋白水解研究表明,突变型SecA与ATP、分泌前蛋白、磷脂和膜囊泡相互作用时发生的构象变化与野生型SecA相似。突变型SecA在转运过程中允许前OmpA的信号肽切割,表明该突变体保留了结合ATP以进行转运反应初始步骤的能力。这些数据表明,Asp - 133的羧基作为催化羧酸盐发挥作用,激活一个水分子攻击ATP的γ - 磷酸基团,并且缺乏该残基的突变体不能完成整个转运过程,但仍能进行蛋白质转运的初始步骤。

相似文献

1
Characterization of a potential catalytic residue, Asp-133, in the high affinity ATP-binding site of Escherichia coli SecA, translocation ATPase.大肠杆菌SecA(转运ATP酶)高亲和力ATP结合位点中潜在催化残基天冬氨酸-133的特性分析
J Biol Chem. 1996 Jul 19;271(29):17439-44. doi: 10.1074/jbc.271.29.17439.
2
Identification of the magnesium-binding domain of the high-affinity ATP-binding site of the Bacillus subtilis and Escherichia coli SecA protein.枯草芽孢杆菌和大肠杆菌SecA蛋白高亲和力ATP结合位点的镁结合结构域的鉴定。
J Biol Chem. 1995 Aug 11;270(32):18975-82. doi: 10.1074/jbc.270.32.18975.
3
Characterization of a Bacillus subtilis SecA mutant protein deficient in translocation ATPase and release from the membrane.一种枯草芽孢杆菌SecA突变蛋白的特性研究,该蛋白在转运ATP酶活性及从膜上释放方面存在缺陷。
Mol Microbiol. 1993 Apr;8(1):31-42. doi: 10.1111/j.1365-2958.1993.tb01200.x.
4
Role of a conserved glutamate residue in the Escherichia coli SecA ATPase mechanism.一个保守的谷氨酸残基在大肠杆菌SecA ATP酶机制中的作用。
J Biol Chem. 2005 Apr 15;280(15):14611-9. doi: 10.1074/jbc.M414224200. Epub 2005 Feb 14.
5
Lysine 106 of the putative catalytic ATP-binding site of the Bacillus subtilis SecA protein is required for functional complementation of Escherichia coli secA mutants in vivo.枯草芽孢杆菌SecA蛋白假定的催化性ATP结合位点的赖氨酸106对于体内大肠杆菌secA突变体的功能互补是必需的。
J Biol Chem. 1993 Feb 25;268(6):4504-10.
6
The catalytic cycle of the escherichia coli SecA ATPase comprises two distinct preprotein translocation events.大肠杆菌SecA ATP酶的催化循环包括两个不同的前体蛋白转运事件。
EMBO J. 1997 Dec 15;16(24):7297-304. doi: 10.1093/emboj/16.24.7297.
7
Integration of SecA protein into the Escherichia coli inner membrane is regulated by its amino-terminal ATP-binding domain.SecA蛋白整合到大肠杆菌内膜的过程受其氨基末端ATP结合结构域的调控。
Mol Microbiol. 1996 Apr;20(1):43-51. doi: 10.1111/j.1365-2958.1996.tb02487.x.
8
Amino-terminal region of SecA is involved in the function of SecG for protein translocation into Escherichia coli membrane vesicles.SecA的氨基末端区域参与SecG将蛋白质转运到大肠杆菌膜泡中的功能。
J Biochem. 1998 Jul;124(1):122-9. doi: 10.1093/oxfordjournals.jbchem.a022070.
9
Two distinct ATP-binding domains are needed to promote protein export by Escherichia coli SecA ATPase.大肠杆菌SecA ATP酶促进蛋白质输出需要两个不同的ATP结合结构域。
Mol Microbiol. 1993 Nov;10(3):483-97. doi: 10.1111/j.1365-2958.1993.tb00921.x.
10
Topology of the integral membrane form of Escherichia coli SecA protein reveals multiple periplasmically exposed regions and modulation by ATP binding.大肠杆菌SecA蛋白整合膜形式的拓扑结构揭示了多个周质暴露区域以及ATP结合的调节作用。
J Biol Chem. 1997 Sep 12;272(37):23239-46. doi: 10.1074/jbc.272.37.23239.

引用本文的文献

1
SecA-Mediated Protein Translocation through the SecYEG Channel.SecA 介导的蛋白质通过 SecYEG 通道的易位。
Microbiol Spectr. 2019 Jul;7(4). doi: 10.1128/microbiolspec.PSIB-0028-2019.
2
Potential of known and short prokaryotic protein motifs as a basis for novel peptide-based antibacterial therapeutics: a computational survey.已知和短原核蛋白基序在新型基于肽的抗菌治疗中的潜力:计算调查。
Front Microbiol. 2014 Jan 21;5:4. doi: 10.3389/fmicb.2014.00004. eCollection 2014.
3
SecA, a remarkable nanomachine.SecA,一种非凡的纳米机器。
Cell Mol Life Sci. 2011 Jun;68(12):2053-66. doi: 10.1007/s00018-011-0681-y. Epub 2011 Apr 10.
4
Role of a conserved glutamate residue in the Escherichia coli SecA ATPase mechanism.一个保守的谷氨酸残基在大肠杆菌SecA ATP酶机制中的作用。
J Biol Chem. 2005 Apr 15;280(15):14611-9. doi: 10.1074/jbc.M414224200. Epub 2005 Feb 14.
5
Probing the active site of YjeE: a vital Escherichia coli protein of unknown function.探究YjeE的活性位点:一种功能未知的重要大肠杆菌蛋白。
Biochem J. 2004 Dec 15;384(Pt 3):577-84. doi: 10.1042/BJ20041082.
6
Negative control of DNA replication by hydrolysis of ATP bound to DnaA protein, the initiator of chromosomal DNA replication in Escherichia coli.通过水解与DnaA蛋白结合的ATP对DNA复制进行负调控,DnaA蛋白是大肠杆菌中染色体DNA复制的起始因子。
EMBO J. 1997 Jun 16;16(12):3724-30. doi: 10.1093/emboj/16.12.3724.