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溶剂同位素效应对鸡蛋清溶菌酶重折叠动力学的影响。

Solvent isotope effects on the refolding kinetics of hen egg-white lysozyme.

作者信息

Itzhaki L S, Evans P A

机构信息

Department of Biochemistry, University of Cambridge, United Kingdom.

出版信息

Protein Sci. 1996 Jan;5(1):140-6. doi: 10.1002/pro.5560050117.

Abstract

Solvent isotope effects have been observed on the in vitro refolding kinetics of a protein, hen lysozyme. The rates of two distinct phases of refolding resolved by intrinsic fluorescence have been found to be altered, to differing extents, in D2O compared with H2O, and experiments have been conducted aimed at assessing the contributions to these effects from various possible sources. The rates were found to be essentially independent of whether backbone amide nitrogens were protiated or deuterated, indicating that making and breaking of their hydrogen bonding interactions is not associated with a substantial isotope effect. Neither were the rates significantly affected by adding moderate concentrations of sucrose or glycerol to the refolding buffer, suggesting that viscosity differences between H2O and D2O are also unlikely to explain the isotope effects. The data suggest that different factors, acting in opposing directions, may be dominant under different conditions. Thus, the isotope effect on the rate-determining step was found to be qualitatively reversed on going to low pH, suggesting that one component is probably associated with changes in the environments of carboxylate groups in forming the folding transition state. This term disappears at low pH as these groups are protonated and an opposing effect then dominates. It was not possible to identify this other effect on the basis of the present data, but a dependence of the hydrophobic interaction on solvent isotopic composition is a likely candidate.

摘要

已观察到溶剂同位素效应会影响蛋白质(鸡蛋清溶菌酶)的体外重折叠动力学。通过内在荧光解析的两个不同重折叠阶段的速率,与在H₂O中相比,在D₂O中已发现有不同程度的改变,并且已开展实验以评估各种可能来源对这些效应的贡献。发现速率基本上与主链酰胺氮是质子化还是氘代无关,这表明其氢键相互作用的形成和断裂与显著的同位素效应无关。向重折叠缓冲液中添加中等浓度的蔗糖或甘油也不会显著影响速率,这表明H₂O和D₂O之间的粘度差异也不太可能解释同位素效应。数据表明,在不同条件下,不同的因素可能以相反的方向起主导作用。因此,发现对速率决定步骤的同位素效应在低pH时定性地反转,这表明一个因素可能与在形成折叠过渡态时羧酸盐基团环境的变化有关。当这些基团质子化时,这个因素在低pH时消失,然后另一个相反的效应占主导。根据目前的数据无法确定这种其他效应,但疏水相互作用对溶剂同位素组成的依赖性是一个可能的因素。

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本文引用的文献

1
Detection of transient protein folding populations by mass spectrometry.
Science. 1993 Nov 5;262(5135):896-900. doi: 10.1126/science.8235611.
4
On the conformation of the hen egg-white lysozyme molecule.
Proc R Soc Lond B Biol Sci. 1967 Apr 18;167(1009):365-77. doi: 10.1098/rspb.1967.0034.
6
Stability of butyrylcholinesterase: thermal inactivation in water and deuterium oxide.
Biochim Biophys Acta. 1988 Nov 2;957(1):111-21. doi: 10.1016/0167-4838(88)90163-x.
7
Renaturation of guanidine-unfolded tryptophan synthase by multi-mixing stopped-flow dilution in D2O.
FEBS Lett. 1988 Dec 5;241(1-2):251-6. doi: 10.1016/0014-5793(88)81071-8.
8
Cold denaturation and 2H2O stabilization of a staphylococcal nuclease mutant.
Proc Natl Acad Sci U S A. 1991 Sep 1;88(17):7715-8. doi: 10.1073/pnas.88.17.7715.
10
Protein-folding dynamics.
Nature. 1976 Apr 1;260(5550):404-6. doi: 10.1038/260404a0.

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