van Heel M, Orlova E V, Dube P, Tavares P
Fritz-Haber-Institut der Max-Planck-Gesellschaft, Berlin, Germany.
EMBO J. 1996 Sep 16;15(18):4785-8.
Large cyclical oligomers may be formed by (curvi-) linear polymerization of monomers until the n(th) monomer locks in with the first member of the chain. The subunits in incomplete structures exhibit a natural curvature with respect to each other which can be perturbed when the oligomer closes cyclically. Using cryo-electron microscopy and multivariate statistical image processing we report herein a direct structural observation of this effect. A sub-population (approximately 15%) of incomplete oligomers was found within a sample of SPP1 bacteriophage portal proteins embedded in vitreous ice. Whereas the curvature between adjacent subunits of the closed circular 13-fold symmetric oligomer is 27.7 degrees, in these incomplete oligomers the angle is only 25.8 degrees, a value which almost allows for a 14-subunit cyclical arrangement. A simple model for the association of large cyclical oligomers is suggested by our data.
大的环状低聚物可通过单体的(曲线)线性聚合形成,直到第n个单体与链的第一个成员锁定。不完全结构中的亚基相互之间呈现出自然曲率,当低聚物环化闭合时,这种曲率可能会受到干扰。本文利用冷冻电子显微镜和多变量统计图像处理技术,直接对这种效应进行了结构观察。在嵌入玻璃态冰中的SPP1噬菌体门户蛋白样品中,发现了一部分(约15%)不完全低聚物。封闭的圆形13重对称低聚物相邻亚基之间的曲率为27.7度,而在这些不完全低聚物中,该角度仅为25.8度,这个值几乎允许14个亚基的环状排列。我们的数据提出了一个关于大环状低聚物缔合的简单模型。