Hammann C, van Pouderoyen G, Nar H, Gomis Rüth F X, Messerschmidt A, Huber R, den Blaauwen T, Canters G W
Max Planck Institut für Biochemie, Abteilung für Struktur Forschung, Martinsried bei München, Germany.
J Mol Biol. 1997 Feb 21;266(2):357-66. doi: 10.1006/jmbi.1996.0764.
The X-ray crystal structures of two metal ligand mutants of azurin from Pseudomonas aeruginosa have been solved. In both mutants (His117Gly and His46Gly azurin) one of the copper coordinating histidine residues is replaced by a glycine, creating an empty space in the coordination sphere of the copper ion. The crystal structure of His117Gly azurin at 2.4 A resolution showed that this mutant had undergone partial oxidation at the disulfide bridge between Cys3 and Cys26 and full oxidation at the copper ligand Cys112. There is no copper present in the crystallized form and the bulky group of the oxidized cysteine at position 112 causes large structural rearrangements in the protein structure, especially in the loops connecting the beta-sheets. In the structure of the wild-type holo-azurin from P. aeruginosa the hydrophobic patch is important for the packing of the azurin molecules into dimers which then arrange into tetramers. The completely different packing of the apo-His117Gly mutant can be explained by the disruption of the hydrophobic patch area by the mutation-induced main-chain conformational change of residues 112 to 115. The structure of apo-His46Gly azurin at 2.5 A resolution is the same as the wild-type structure except for the immediate environment at the site of the mutation. In the His46Gly structure water molecules are found at positions that in the wild-type structure are occupied by the imidazole ring of His46 and the copper ion. The imidazole ring of His117 is shifted by about 1 A towards the surface of the protein, similar to that observed for 50% of the molecules in the wild-type apo-azurin structure. This shift causes a slight rearrangement of the monomers within the tetramer such that one local dyad becomes a crystallographic dyad parallel to the c-axis. This leads to a change in the space group from P2(1)2(1)2(1) to P2(1)2(1)2.
已解析出铜绿假单胞菌天青蛋白两种金属配体突变体的X射线晶体结构。在这两种突变体(His117Gly和His46Gly天青蛋白)中,一个与铜配位的组氨酸残基被甘氨酸取代,在铜离子的配位球中产生了一个空位。His117Gly天青蛋白在2.4埃分辨率下的晶体结构表明,该突变体在Cys3和Cys26之间的二硫键处发生了部分氧化,在铜配体Cys112处发生了完全氧化。结晶形式中不存在铜,112位氧化半胱氨酸的庞大基团导致蛋白质结构发生大的结构重排,尤其是在连接β-折叠的环中。在铜绿假单胞菌野生型全天青蛋白的结构中,疏水补丁对于天青蛋白分子堆积成二聚体然后排列成四聚体很重要。apo-His117Gly突变体完全不同的堆积方式可以通过突变诱导的112至115位残基主链构象变化破坏疏水补丁区域来解释。apo-His46Gly天青蛋白在2.5埃分辨率下的结构与野生型结构相同,除了突变位点的紧邻环境。在His46Gly结构中,水分子位于野生型结构中被His46的咪唑环和铜离子占据的位置。His117的咪唑环向蛋白质表面移动了约1埃,类似于在野生型脱辅基天青蛋白结构中50%的分子中观察到的情况。这种移动导致四聚体内单体的轻微重排,使得一个局部二体成为平行于c轴的晶体学二体。这导致空间群从P2(1)2(1)2(1)变为P2(1)2(1)2。