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嗜热古菌嗜热栖热菌β-糖苷酶的多色氨酸荧光发射衰减

Multitryptophan-fluorescence-emission decay of beta-glycosidase from the extremely thermophilic archaeon Sulfolobus solfataricus.

作者信息

Bismuto E, Irace G, D'Auria S, Rossi M, Nucci R

机构信息

Dipartimento di Biochimica e Biofisica, Seconda Università di Napoli, Italy.

出版信息

Eur J Biochem. 1997 Feb 15;244(1):53-8. doi: 10.1111/j.1432-1033.1997.00053.x.

DOI:10.1111/j.1432-1033.1997.00053.x
PMID:9063445
Abstract

The emission decay of intrinsic fluorescence of the extremely thermophilic beta-glycosidase from Sulfolobus solfataricus has been investigated as functions of temperature and of iodide-quencher concentration by frequency-domain fluorometry. This protein contains 68 tryptophans and provides a matrix for correlation of the average spectroscopic behaviour with solvent exposure and local dynamics. At each temperature, the emission is very heterogeneous and interpretable in terms of quasicontinuous bimodal distribution of fluorescence lifetimes. We associate the component of the bimodal distribution to two distinct classes of tryptophanyl residues that differ in microenvironmental characteristics. Temperature and quenching experiments show that the long-lived component includes tryptophanyl residues located in buried regions with high rigidity; the short distributional component corresponds to tryptophans embedded in more flexible and exposed regions. This proposal has been confirmed by examination of the crystallographic structure. The data suggest that, at least for this protein, there is a good correlation between residue exposure and lifetime distributional components. The conformational dynamics of the two classes of tryptophanyl residues is affected differently by temperature, suggesting that the protein regions in which they are located give different contributions to enzyme properties, such as flexibility, stability and function.

摘要

通过频域荧光法研究了嗜热栖热菌中嗜热β-糖苷酶的固有荧光发射衰减与温度和碘化物猝灭剂浓度的关系。这种蛋白质含有68个色氨酸,为将平均光谱行为与溶剂暴露和局部动力学进行关联提供了一个基质。在每个温度下,发射都非常不均匀,并且可以根据荧光寿命的准连续双峰分布来解释。我们将双峰分布的成分与两类微环境特征不同的色氨酸残基联系起来。温度和猝灭实验表明,长寿命成分包括位于刚性较高的埋藏区域的色氨酸残基;短分布成分对应于嵌入更灵活和暴露区域的色氨酸。通过对晶体结构的检查证实了这一推测。数据表明,至少对于这种蛋白质,残基暴露与寿命分布成分之间存在良好的相关性。两类色氨酸残基的构象动力学受温度的影响不同,这表明它们所在的蛋白质区域对酶的性质,如柔韧性、稳定性和功能有不同的贡献。

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引用本文的文献

1
Heterogeneity in the structural dynamics of Sulfolobus solfataricus beta-glycosidase revealed by electron paramagnetic resonance and frequency domain fluorometry.通过电子顺磁共振和频域荧光法揭示的嗜热栖热菌β-糖苷酶结构动力学的异质性
Protein Sci. 2002 Nov;11(11):2535-44. doi: 10.1110/ps.0212802.
2
Tryptophanyl fluorescence lifetime distribution of hyperthermophilic beta-glycosidase from molecular dynamics simulation: a comparison with the experimental data.基于分子动力学模拟的嗜热β-糖苷酶色氨酸荧光寿命分布:与实验数据的比较
Protein Sci. 2000 Sep;9(9):1730-42. doi: 10.1110/ps.9.9.1730.