Evans E, Moggs J G, Hwang J R, Egly J M, Wood R D
Imperial Cancer Research Fund, Clare Hall Laboratories, Hertfordshire, UK.
EMBO J. 1997 Nov 3;16(21):6559-73. doi: 10.1093/emboj/16.21.6559.
During nucleotide excision repair in human cells, a damaged DNA strand is cleaved by two endonucleases, XPG on the 3' side of the lesion and ERCC1-XPF on the 5' side. These structure-specific enzymes act at junctions between duplex and single-stranded DNA. ATP-dependent formation of an open DNA structure of approximately 25 nt around the adduct precedes this dual incision. We investigated the mechanism of open complex formation and find that mutations in XPB or XPD, the DNA helicase subunits of the transcription and repair factor TFIIH, can completely prevent opening and dual incision in cell-free extracts. A deficiency in XPC protein also prevents opening. The absence of RPA, XPA or XPG activities leads to an intermediate level of strand separation. In contrast, XPF or ERCC1-defective extracts open normally and generate a 3' incision, but fail to form the 5' incision. This same repair defect was observed in extracts from human xeroderma pigmentosum cells with an alteration in the C-terminal domain of XPB, suggesting that XPB has an additional role in facilitating 5' incision by ERCC1-XPF nuclease. These data support a mechanism in which TFIIH-associated helicase activity and XPC protein catalyze initial formation of the key open intermediate, with full extension to the cleavage sites promoted by the other core nucleotide excision repair factors. Opening is followed by dual incision, with the 3' cleavage made first.
在人类细胞的核苷酸切除修复过程中,一条受损的DNA链被两种核酸内切酶切割,损伤位点3'侧的XPG和5'侧的ERCC1-XPF。这些结构特异性酶作用于双链和单链DNA之间的连接处。在这种双重切割之前,依赖ATP形成围绕加合物的约25个核苷酸的开放DNA结构。我们研究了开放复合物形成的机制,发现转录和修复因子TFIIH的DNA解旋酶亚基XPB或XPD中的突变可完全阻止无细胞提取物中的开放和双重切割。XPC蛋白的缺陷也会阻止开放。缺乏RPA、XPA或XPG活性会导致链分离处于中等水平。相比之下,XPF或ERCC1缺陷的提取物正常开放并产生3'切口,但无法形成5'切口。在XPB C末端结构域发生改变的人类着色性干皮病细胞提取物中也观察到相同的修复缺陷,这表明XPB在促进ERCC1-XPF核酸酶进行5'切割方面具有额外作用。这些数据支持一种机制,即与TFIIH相关的解旋酶活性和XPC蛋白催化关键开放中间体的初始形成,其他核心核苷酸切除修复因子促进其完全延伸至切割位点。开放之后是双重切割,首先进行3'切割。