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IAsys生物传感器数据传统动力学分析中伪一级近似的理论与实验考量

Theoretical and experimental considerations of the pseudo-first-order approximation in conventional kinetic analysis of IAsys biosensor data.

作者信息

Hall D R, Gorgani N N, Altin J G, Winzor D J

机构信息

Center for Protein Structure, Function and Engineering, University of Queensland, Brisbane, QLD 4072, Australia.

出版信息

Anal Biochem. 1997 Nov 15;253(2):145-55. doi: 10.1006/abio.1997.2358.

Abstract

The validity of the conventional interpretation of IAsys biosensor profiles in terms of pseudo-first-order kinetic behavior is subjected to closer scrutiny by its application to simulated data for low- and high-affinity interactions between ligate and immobilized ligand. As might reasonably have been expected, analysis of the simulated data for the low-affinity system (association equilibrium constant of 10(5) M-1) in such terms returned the input association and dissociation rate constants (10(3) M-1 s-1 and 10(-2) s-1, respectively)-a consequence of essential compliance with the assumed constancy of ligate concentration in the liquid phase. For the high-affinity interaction (ka = 10(5) M-1 s-1, kd = 10(-2) s-1, KAX = 10(7) M-1) the ligate concentration was depleted by up to 35%, and hence its assumed constancy was clearly an untenable approximation. Whereas no symptomatic evidence of such violation (apart from the return of incorrect estimates of ka and kd) was evident from pseudo-first-order kinetic analysis of the adsorption profiles, the corresponding analysis of desorption profiles was more informative in that the data deviated demonstrably from pseudo-first-order kinetic behavior. A second-order kinetic analysis was therefore developed and shown to be applicable to adsorption and desorption profiles, irrespective of the validity or otherwise of the pseudo-first-order kinetic approximation. Experimental results obtained for the interaction of histidine-rich glycoprotein with immobilized IgG were then used to illustrate various features of the pseudo-first-order and second-order kinetic analyses, and to determine from the second-order analysis an association equilibrium constant of 2 x 10(8) M-1, which is 20-fold greater than the value obtained by interpretation of the profiles in terms of pseudo-first-order kinetic behavior.

摘要

通过将IAsys生物传感器谱在拟一级动力学行为方面的传统解释应用于配体与固定化配体之间低亲和力和高亲和力相互作用的模拟数据,对其有效性进行了更深入的审查。正如合理预期的那样,以这种方式对低亲和力系统(缔合平衡常数为10⁵ M⁻¹)的模拟数据进行分析,得到了输入的缔合和解离速率常数(分别为10³ M⁻¹ s⁻¹和10⁻² s⁻¹),这是液相中配体浓度假定恒定的必然结果。对于高亲和力相互作用(ka = 10⁵ M⁻¹ s⁻¹,kd = 10⁻² s⁻¹,KAX = 10⁷ M⁻¹),配体浓度最多消耗了35%,因此其假定的恒定性显然是一个站不住脚的近似值。虽然从吸附曲线的拟一级动力学分析中没有明显的此类违反迹象(除了ka和kd的估计值错误),但解吸曲线的相应分析更具信息量,因为数据明显偏离了拟一级动力学行为。因此开发了二级动力学分析,并表明其适用于吸附和解吸曲线,无论拟一级动力学近似是否有效。然后,使用富含组氨酸的糖蛋白与固定化IgG相互作用获得的实验结果来说明拟一级和二级动力学分析的各种特征,并通过二级分析确定缔合平衡常数为2×10⁸ M⁻¹,这比根据拟一级动力学行为解释曲线得到的值大20倍。

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