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粪肠球菌含组氨酸磷酸载体蛋白的结构研究。

Structural studies of histidine-containing phosphocarrier protein from Enterococcus faecalis.

作者信息

Hahmann M, Maurer T, Lorenz M, Hengstenberg W, Glaser S, Kalbitzer H R

机构信息

Max-Planck-Institute for Medical Research, Dept. Biophysics, Heidelberg, Germany.

出版信息

Eur J Biochem. 1998 Feb 15;252(1):51-8. doi: 10.1046/j.1432-1327.1998.2520051.x.

Abstract

Based on the complete sequential assignment of the 1H-NMR spectrum by multidimensional NMR techniques the secondary structure and the local geometry of the active site of histidine-containing phosphocarrier protein (HPr) from Enterococcus faecalis were elucidated. We present a comparative analysis of the active site in the seven known structures of HPr from different organisms determined by NMR or X-ray crystallography. In catalysis, HPr is phosphorylated at the ring N61 of His15. No general agreement exists in literature regarding the structure of the active-centre loop. In the crystal structure of HPr from E. faecalis, a torsion strain of the backbone at position 16 was observed, which was assumed to be important to the catalytic mechanism. Coupling constants were determined in order to calculate phi angles to establish whether there are strained torsion angles in HPr from E. faecalis in the solution state. The evaluation of data obtained indicate a stable and well-defined structure of HPr from E. faecalis, with an overall fold similar to that found in HPr from other bacteria. We find that in the active-site region there are relatively large variations in local geometry between the evaluated structures. In HPr from E. faecalis, a particularly detailed view of the phosphate-binding His15 and residues in close spatial proximity was obtained by determination of coupling constants obtained from the double-quantum-filtered COSY spectrum. Our data indicate that in aqueous solution, in the dominant conformational state there is no torsion strain of the backbone at position 16, as observed in the crystal state. The maximum population of a strained conformation in solution can be estimated to be smaller than 23%. The analysis of the data suggests that the active-centre loop is able to adopt different conformations in solution. A similar observation was made for HPr from E. faecalis phosphorylated at its regulatory site (Ser46). 31P-NMR shows that phosphorylated HPr exists in two conformational substates with nearly equal populations.

摘要

基于通过多维核磁共振技术对1H-NMR谱的完全顺序归属,阐明了粪肠球菌含组氨酸的磷酸载体蛋白(HPr)活性位点的二级结构和局部几何结构。我们对通过核磁共振或X射线晶体学确定的来自不同生物体的七种已知HPr结构中的活性位点进行了比较分析。在催化过程中,HPr在His15的环N61处被磷酸化。关于活性中心环的结构,文献中尚无普遍共识。在粪肠球菌HPr的晶体结构中,观察到16位主链存在扭转应变,这被认为对催化机制很重要。测定了耦合常数以计算phi角,以确定粪肠球菌HPr在溶液状态下是否存在应变扭转角。对所得数据的评估表明,粪肠球菌HPr具有稳定且明确的结构,其整体折叠与其他细菌的HPr相似。我们发现,在活性位点区域,所评估结构之间的局部几何结构存在相对较大的差异。通过测定从双量子滤波COSY谱获得的耦合常数,获得了粪肠球菌HPr中磷酸结合His15及其紧密空间邻近残基的特别详细的视图。我们的数据表明,在水溶液中,在主要构象状态下,16位主链不存在如晶体状态中观察到的扭转应变。溶液中应变构象的最大丰度估计小于23%。数据分析表明,活性中心环在溶液中能够采取不同的构象。对在其调节位点(Ser46)磷酸化的粪肠球菌HPr也有类似的观察结果。31P-NMR表明,磷酸化的HPr以两种构象亚态存在,丰度几乎相等。

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