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利用一个86个碱基对的外显子可产生一种缺乏MARCKS同源结构域的新型内收蛋白异构体(β4)。

Utilization of an 86 bp exon generates a novel adducin isoform (beta 4) lacking the MARCKS homology domain.

作者信息

Sinard J H, Stewart G W, Stabach P R, Argent A C, Gilligan D M, Morrow J S

机构信息

Department of Pathology, Yale University School of Medicine, New Haven, CT 06510, USA.

出版信息

Biochim Biophys Acta. 1998 Mar 4;1396(1):57-66. doi: 10.1016/s0167-4781(97)00167-x.

Abstract

A novel isoform of beta-adducin has been amplified and characterized from a human bone marrow cDNA library (GenBank #U43959). This isoform arises from the insertion of an 86 bp alternatively spliced and previously unrecognized exon (now termed exon 15) within codon 581 of the human red blood cell beta-adducin sequence. This results in an insertion of 28 novel amino acids. The remainder of the red cell beta-adducin mRNA is then translated in a different reading frame, adding an additional 35 novel amino acids prior to the stop codon. This new isoform, thus, replaces beta 1-adducin sequence after residue 580 with a total of 63 new amino acids. Sequences from genomic clones of the human beta-adducin gene show that this alternate exon is flanked by splice consensus sequences and is appropriately located in the genomic map between exons encoding up-stream and down-stream sequences, thus defining a new exon. The COOH-terminus of this new isoform, which we designate beta 4, lacks a 22 amino acid lysine-rich sequence common to both the human red cell alpha- and beta-adducin subunits and homologous to a highly conserved region in MARCKS, a filamentous actin-cross linking protein regulated by protein kinase C and calcium/calmodulin. beta 4-adducin preserves a previously identified calmodulin binding domain. PCR analysis indicates that this new beta-adducin isoform is expressed in fetal brain and liver, bone marrow, and NT-2 (neuroepithelial) cells, but is not detected in several other tissues. We anticipate that this new beta 4 isoform of beta-adducin will display unique and tissue-specific functional properties.

摘要

一种新型β-加合素同工型已从人骨髓cDNA文库(GenBank编号:U43959)中扩增并鉴定出来。这种同工型是由于在人红细胞β-加合素序列的第581密码子内插入了一个86bp的选择性剪接且先前未被识别的外显子(现称为外显子15)而产生的。这导致插入了28个新的氨基酸。然后,红细胞β-加合素mRNA的其余部分以不同的阅读框进行翻译,在终止密码子之前又添加了35个新的氨基酸。因此,这种新的同工型在第580位残基之后取代了β1-加合素序列,共有63个新的氨基酸。人β-加合素基因基因组克隆的序列表明,这个可变外显子两侧是剪接共有序列,并且恰当地位于编码上游和下游序列的外显子之间的基因组图谱中,从而定义了一个新的外显子。我们将这种新同工型的COOH末端命名为β4,它缺乏人红细胞α-和β-加合素亚基共有的一个富含22个氨基酸的赖氨酸序列,该序列与MARCKS中的一个高度保守区域同源,MARCKS是一种受蛋白激酶C和钙/钙调蛋白调节的丝状肌动蛋白交联蛋白。β4-加合素保留了先前鉴定的钙调蛋白结合结构域。PCR分析表明,这种新的β-加合素同工型在胎儿脑、肝、骨髓和NT-2(神经上皮)细胞中表达,但在其他几种组织中未检测到。我们预计,这种新的β-加合素β4同工型将表现出独特的组织特异性功能特性。

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