Komarov Iu E, Sivozhelezov V S, Postnikova G B
Institute of Cell Biophysics, Russian Academy of Science, Pushchino, Moscow Region, Russia.
Biofizika. 1998 Jan-Feb;43(1):16-25.
The nonlinear regression method was used for the evaluation of applicability of the known model equations (Wherland-Gray, Brönsted-Debay-Hukkel and "parallel disks") which describe the ionic strength dependence of the reaction rate between charged molecules to the redox reaction of cytochrome c with sperm whale myoglobin modified at His 12(A10) with the bromoacetate spin label, and pig myoglobin. Unlike the native sperm whale Mb studied earlier [1], the objects chosen have monotonous pH-dependence of the reaction rate and are more simple with regards to electrostatic interactions in the electron-transfer complex. This allowed to study the influence of the total as well as the local protein charge on the correspondence of the ion strength dependencies to the theoretical models and optimal parameters of the equations. It was shown that the models considered, as in the case of the native sperm whale Mb-Cyt c reaction, permit satisfactory description of the experimental data, but the obtained parameters cannot be applied to the whole proteins or their contact sites. In the best case (Wherland-Gray equation) it is possible to do if the distribution of electrostatic potential in the contact area is considered. The reason can be that, unlike other protein redox-systems, the contact sites of both Mb and Cyt c have the charged residues of both signs, and the His GH1 residue located in the contact Mb site is not only involved in the electrostatic interactions in electron-transfer complex, but also participates directly in the mechanism of charge transfer.
采用非线性回归方法评估已知模型方程(韦兰德 - 格雷方程、布仑斯惕 - 德拜 - 休克尔方程和“平行圆盘”方程)的适用性,这些方程描述了带电分子间反应速率对离子强度的依赖性,用于细胞色素c与在12位组氨酸(A10)处用溴乙酸自旋标记修饰的抹香鲸肌红蛋白以及猪肌红蛋白的氧化还原反应。与早期研究的天然抹香鲸肌红蛋白[1]不同,所选择的研究对象具有单调的反应速率pH依赖性,并且在电子转移复合物中的静电相互作用方面更为简单。这使得能够研究总蛋白电荷以及局部蛋白电荷对离子强度依赖性与理论模型及方程最佳参数之间对应关系的影响。结果表明,所考虑的模型如同天然抹香鲸肌红蛋白 - 细胞色素c反应的情况一样,能够令人满意地描述实验数据,但所获得的参数不能应用于整个蛋白质或它们的接触位点。在最佳情况下(韦兰德 - 格雷方程),如果考虑接触区域内静电势的分布则是可行的。原因可能是,与其他蛋白质氧化还原系统不同,肌红蛋白和细胞色素c的接触位点都含有正负两种电荷的残基,并且位于接触肌红蛋白位点的组氨酸GH1残基不仅参与电子转移复合物中的静电相互作用,还直接参与电荷转移机制。